KEGG   Citrus x clementina (clementine): CICLE_v10027820mg
Entry
CICLE_v10027820mg CDS       T02982                                 
Name
(RefSeq) hypothetical protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cic  Citrus x clementina (clementine)
Brite
KEGG Orthology (KO) [BR:cic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cic03041]
    CICLE_v10027820mg
Spliceosome [BR:cic03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    CICLE_v10027820mg
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    CICLE_v10027820mg
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 18034051
NCBI-ProteinID: XP_006423263
UniProt: V4RQ03
Position
Unknown
AA seq 709 aa
MARRDSSESSDDDRERRRRYSDRKKETRSVGRRDRGDESDNSSDSDQKQHRHERRNERGN
GNSNRPDEERDVSDRREGERDKDKRDLRQDVREESKNDGEEEEGKDGKRVKRDRRDRERE
RGRERGRQDENGEDGFLRKEDRHRCRDLGEDNEREERRKSDRGRDRRRNARDRRRNDDDD
DDEDDQKYRDRREIKKDEDGDTKYRRDKEKDRRREESRNKDDSKAVGDSKVKSTRQEGNV
NGGDAALTLGRSGGVYIPPFKLARMMKDVEDKSSAEYQRLTWDALRKSINGLVNKVNATN
IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFTAVGELLLKRI
VLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTILLENPTDDSVEVAVGFV
KECGSILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPEL
DLVDIEDQLTHEISLQDEIDPEITLDIFKPDPNFLDNEKRYEDMKKDLLGETSEDEEGSD
AGSGDEDDSEEEEEEEDEEQMKIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKL
EPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLET
NKLRNVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQVV
NT seq 2130 nt   +upstreamnt  +downstreamnt
atggctagacgagacagtagtgagtctagcgacgatgacagagagagacgccgtcgttat
agtgatagaaaaaaggaaaccagatccgtcggtcgtcgggatcgcggagacgagtcggat
aattcgtctgattctgaccagaaacagcatcgacacgagaggcgcaatgagcgaggcaat
ggtaacagtaatagacctgacgaggagagagatgtaagtgacaggcgtgaaggtgagaga
gacaaggataagcgtgacctgcggcaggatgtaagagaggagagtaagaatgatggggag
gaggaggaggggaaggatggtaagcgtgtgaaaagagaccgaagagatagggaaagggag
cgggggagagagagagggcggcaagatgagaatggagaggatgggtttttaagaaaggaa
gaccgtcatagatgtagggatttaggcgaggacaatgagagggaagaacgcaggaaatca
gatagaggaagggataggaggcgtaatgctcgtgataggagacgcaatgatgatgatgat
gatgatgaagatgatcaaaagtatagggataggagagagataaagaaagatgaggatggt
gatacaaaatacaggagagacaaggagaaggatagaagacgggaagaaagtcggaataag
gatgatagtaaggcagtgggtgattcgaaagttaaaagcacgaggcaagagggtaatgtg
aatggtggtgatgcagcattgaccttgggtaggagtggaggggtttatattccgcctttt
aagttggcacggatgatgaaagatgtggaagataaaagcagtgctgagtatcagcgtttg
acatgggatgcccttcgtaagagtattaatgggcttgttaacaaggtcaatgcaactaat
attaagaatattattcctgagctttttgcggagaatctcattcgaggaaggggtcttttc
tgccgatcttgtatgaaatcgcaaatggcatcgccgggtttcacagatgtgtttgcggct
ttggtagctgttgtcaacaccaagtttactgcagtgggtgaactcttactgaaaagaata
gttttgcagcttaaaagagcttataagcggaatgacaagccacaattgctagcagctgtt
aaatttatagcgcatttagtaaaccaacaagtagctcatgagattatagctttagagctg
ctcacgattttgctggagaatcctactgatgatagtgttgaagtagctgttggctttgtt
aaagagtgtggatcgatactacaggatctttcaccaaagggacttcatggtatttttgag
cggtttcgtggaattctacatgaaggagagatagacaaacgagttcaatttttgattgaa
ggcctgtttgccataaggaaagcaaaatttcagggttaccccgctgttcgtccagagctg
gatcttgttgatatcgaggatcaattgactcatgagatatcgcttcaagatgaaattgat
ccggagattacccttgatatcttcaaaccggatcctaacttcttggacaatgaaaaacgc
tatgaagatatgaagaaagacctccttggtgagacatctgaggatgaagaaggatctgat
gcaggttcaggggatgaggatgattccgaagaagaagaagaagaagaagatgaggaacag
atgaagataaaagatgaaacagaaacaaaccttgtaaatcttcgaaggacaatttatcta
acaattatgtctagcgtagattttgaagaggccggccacaaactactgaaaattaaactg
gagccaggtcaagagatggagttgtgtattatgcttttggagtgttgcagtcaggagaga
acttatcttcggtattatggattattggggcaacggttctgcatgataaacaaagtccat
caagaaaattttgagaaatgcttcgtccagcaatattctatgattcatagacttgaaacc
aataaattacgtaatgtggccaaattttttgctcatttacttggaacccatgctctgcct
tggcatgttttagcttacatacggttaacagaggaggacaccacttcatcttcccgtatt
ttcataaagattctcttccaggtggtgtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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