KEGG   Ctenopharyngodon idella (grass carp): 127502560
Entry
127502560         CDS       T08802                                 
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    127502560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cide03019]
    127502560
Enzymes [BR:cide01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     127502560
Messenger RNA biogenesis [BR:cide03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     127502560
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 127502560
NCBI-ProteinID: XP_051731501
Position
20
AA seq 740 aa
MPFPITNQVQAVQQTPKHYGITSPISLAPPKEADLVLTRKLTETLRPFGVFEEEMELQRR
ILVLGKLNMLVKLWIREVSEAKNIPSSVIDSVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVDRSDFFSSFYEKLKEQEEVKDLRAVEEAFVPVIKLAFDGIEIDILFARLALQTIPEN
LDLRDDGLLRNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKMWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVHKFFLVFSKWEWPNPVLLKQPEDCNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRAIMVEEFKRGLAITDEILQNKADWSKL
FEAPNFFQKYKHYIVLLASAQTEKQHLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PGPKEGTDKEEFSTMWVIGIVFKKMEGSENLNVDLTFDIQSFTDTVYRQAITSKMFEQDM
KITAMHVKRKQLHQLLPKVAIQRGKRKHSSDGLRVMNDGSLDLSVDSDNSMSVPSPTGPS
AAKSARASSPQGSTGTATNSSDLQGKTDTSSGSTLLAGAVDGTKPDNVGTSSSNSPRKGA
AALKRPASPLQQDLEKKHKVDSVQQNPNPSPCLSAGPAKKRPASPLENETSKKAKAEEFS
TPEAKSSGETDGHVAVDPAVVEVVPSDGEFKTETELTAVDIAEKIPLTQKTSSADLSDVP
VLPTNPIAVVKNSIKLRLSR
NT seq 2223 nt   +upstreamnt  +downstreamnt
atgccttttccaattaccaatcaggtgcaagcagtacagcagaccccaaagcattatggg
atcacgtctcctatcagcttggcaccgcctaaagaggccgatctggttcttacgcgaaag
ctgacagagacactccgacccttcggtgtctttgaggaggagatggagctgcagcggaga
atcctagtgcttgggaagttaaatatgttggttaagttgtggatccgtgaagtcagtgaa
gctaagaatattccatcatcagtgattgatagtgttggtggaaaaatcttcacgtttgga
tcctacaggcttggagttcatacgaagggtgctgatattgatgctctctgcgttgcaccc
cgacatgtggacagatcagacttcttctcctcgttttatgagaaattaaaggagcaggag
gaagtcaaagacctgagggcagtggaggaagcatttgtacctgtgataaagctggctttt
gatggcattgagattgacatactgtttgcccgactggcactacaaaccattccagagaac
ctggatttgcgagatgatggcttacttaggaaccttgacattcgctgtatccgaagtttg
aatggttgcagagtgactgatgagattcttcacctggtgcccaacatcgagaatttcaga
ctgactcttagagccatcaaaatgtgggcaaaacgtcataatatctactcgaacatcctt
ggttttctcgggggcgtatcgtgggccatgctggtggcacgaacctgccaactctacccc
aacgctgtggcttccaccctggtccacaagttctttttggttttctcaaagtgggaatgg
ccaaaccctgtccttctgaagcagcctgaagactgtaatctcaacctcccagtctgggat
cccagagtaacccccagtgaccggtaccacctcatgccaatcatcacaccagcttaccct
caacagaattccacttacaatgtctcagcatctactcgggccatcatggtggaagagttc
aagcggggtcttgcaatcacggatgaaatattgcagaataaagcagattggtccaaacta
tttgaagcaccaaacttctttcagaaatacaagcattatatagtgttgctagcaagcgca
cagacagagaagcagcacttagagtgggtgggcctcgtggaatcaaagatccgaatcctg
gtgggaaacttggagaagaatgagtttatcacactcgcccatgtaaatccacagtcattc
ccgggaccaaaagagggaactgacaaggaggagttcagcacaatgtgggtaataggtatt
gtgttcaaaaaaatggagggatcagaaaatcttaacgtggacctgacgtttgacatccag
tccttcacagacacagtttaccggcaggcgatcactagtaaaatgtttgagcaagatatg
aaaatcacagccatgcatgtgaagaggaaacaactgcatcaactacttcccaaagtcgcc
attcaaaggggcaagagaaagcattcgtctgatggccttcgtgtgatgaatgacggcagt
ctcgacctatcggttgacagtgacaacagcatgtcagtgccctcccccacgggcccttca
gctgccaagagtgcccgtgcctccagccctcagggttccactgggacggccacaaacagc
tcagatttgcagggaaaaacggacacctcaagtggaagcacgctcctggctggtgcagtg
gatggcactaaacctgataatgttgggacttccagcagcaattccccgcgaaagggggct
gctgcactaaagaggcctgcctcaccccttcagcaagatttggagaagaaacacaaagta
gacagtgtacaacagaaccctaatcctagtccatgtttatctgctggccctgccaagaag
agacctgcctcaccccttgagaatgagacgtccaagaaagccaaagcagaggaattctca
accccagaagcaaagtcctcaggtgaaactgatggtcatgtagctgtggatccagcggtc
gttgaagtagttccttcagatggtgaatttaaaacggagactgaattaacggcggtggac
atagcagagaagatcccgcttacccagaaaacttccagcgctgatctgtcagacgtccca
gtcctaccgaccaaccccatcgccgtggtcaagaactctatcaagctgagactcagcagg
tag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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