KEGG   Carya illinoinensis (pecan): 122317740
Entry
122317740         CDS       T08745                                 
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122317740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122317740
Enzymes [BR:cill01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     122317740
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     122317740
SSDB
Motif
Pfam: PAP_NTPase PAP_central MTPAP-like_central NTP_transf_2 PAP_RNA-bind UbiA TUTase
Other DBs
NCBI-GeneID: 122317740
NCBI-ProteinID: XP_042990670
Position
1
AA seq 494 aa
MDEERSISLVQFMVNEGLVPSPDEEEKRKNVILKLKEIVLTWIKKVAWQRRFPKEQIAAA
CATILTYGSYGLGVHGSESDIDALCVGPLFATMAQEDFFIVLHNMLKSRPEVSEIHCVKD
AKVPLIWFEFDGISIDLPYAQLKVSSVPENVDVLNPYFLRDVNVTSWKSLSGVRANKRIL
QLVPNLENFQSMLRCVKLWAKRRGVYGNLLGFLGGVHLAILAASVCQKHPNASLNSLIVN
FFQMFAFWPWPTPVILQDGILPTTRDAIEIRSLMPIQLPCSPYEYCHSNVTRSTFRRIRA
EFLRGHDRTRDLLKPDFDWGSVFEHFPYPKEYTRFVKIYLSASDQDDLGDWVGWVKSRFC
SLLTKLEEVQGFCDPNPVEHVDMDVTEPNVVFYWGLNPSKSSFTDILHVEEDFMKNLKNG
YQGSAGGMGLSILQASQLPKSALLDTGIGKRTKACWKILDYNLRRTPMYSQHLPHYFVGY
VATDREPEHPRDGG
NT seq 1485 nt   +upstreamnt  +downstreamnt
atggacgaggaaaggtcaatctctctggttcagttcatggttaatgaaggactcgtgccg
tctccggacgaggaagagaagaggaaaaatgtcattttgaagctcaaagagatagttttg
acatggattaagaaggttgcatggcaacgtcgttttccaaaagagcaaattgctgctgcc
tgtgccacaattctgacttatggatcatatggcctcggagttcatggttcggaatccgac
attgatgctttatgtgttggccctctctttgcaaccatggcacaggaggacttttttatt
gttctgcacaacatgcttaaaagcagacctgaagtatcagagatccactgtgtaaaggat
gcaaaagttcctctaatttggtttgaatttgatggaatctcaattgatctcccatatgcg
caacttaaggtgtcatctgttcctgaaaatgtggatgtattaaacccatacttcctaagg
gatgtcaatgtaactagctggaagagcttgtctggtgtacgtgctaacaaacgcattctt
cagcttgttccaaacttggagaatttccaatcaatgctgcgatgtgttaaattatgggct
aaaaggcgaggagtatatggtaatttacttggctttttgggaggagttcatctagcaatt
cttgcagcttctgtttgtcaaaagcatccaaatgctagcttaaattctcttattgtgaat
ttcttccagatgtttgcattttggccttggcctactcctgttatattgcaagatggaata
ttgcctactaccagagatgccattgagatacgatccttaatgcctatacagctgccgtgt
agtccatacgaatattgccattccaatgtcactagaagcacattccgcaggatcagggca
gagtttctccgaggtcatgatagaactagggatcttttgaagccagattttgattggggt
agtgtatttgagcatttcccatatccaaaggagtatacacgatttgtcaaaatttacctc
tcagcttctgaccaagatgatcttggagattgggtaggttgggtgaaatcacgtttttgc
tctcttcttaccaagttggaggaggtgcaaggtttttgtgaccctaaccctgttgaacat
gtagatatggatgtaacagagcccaatgttgtgttctactggggcttaaatcccagcaag
agtagtttcacagatatactgcatgttgaagaggatttcatgaagaatctcaaaaatggc
tatcaaggatctgctggagggatgggattatccattttgcaagcttcgcagctgcctaag
agtgctcttcttgacactggaatagggaagcggacgaaagcatgttggaaaattctcgat
tacaatcttcgaagaaccccaatgtactctcagcatttgccacattactttgttgggtat
gtggcaaccgacagagagcctgagcacccacgtgatgggggttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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