KEGG   Citrus sinensis (Valencia orange): 102613009
Entry
102613009         CDS       T02983                                 
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X3
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102613009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102613009
Enzymes [BR:cit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     102613009
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     102613009
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DNA_pol_B_palm Nrap_D2
Other DBs
NCBI-GeneID: 102613009
NCBI-ProteinID: XP_006465702
UniProt: A0ACB8JAY1
Position
7:join(8607671..8607790,8607876..8607953,8608638..8608745,8608943..8609005,8609093..8609254,8610046..8610159,8610292..8610354,8610434..8610763,8610838..8611002,8611115..8611900,8612164..8612243,8612349..8612373)
AA seq 697 aa
MSSSERMSSPPPPKQYGVTKPISMAGPTEADIQRNRELEKFLVEAGLYESKEEDEKREQV
LGRIRQIAKDWVKQLTRLRGYSDQMVEDANALIFTFGSYRLGVHGPGADIDALCVGPSYV
SREEDFFFILHNILAEMEEVTELQPVLDAHVPVMKFKFDGLSIDLLYASISRLVVREDLD
ISDMSVLYDVDEPAGRSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGF
LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTMWRWPNPVMLCTIEEAELGFSVWDPR
KNRRDKTHHMPIITPAYPCMNSSYNVSTSTLRVMVDQFQYGNTICEEVELNKAQWSALFE
PYLFFESYRNYLQVDIVAANADDLLAWKGWVESRLRQLTLMIERDTYGKLQCHPYPHEYV
DTSKPCAHCAFFMGLQRKPGEVVQEGQQFDIRGSVEEFKLSINMYMFWKPGMEICVSHIR
RKQIPPYVFPEGYKRTRHPRLASQQRSSENGNEYQTGSGLKRKKDPESVDQDGPEKRQSI
SPQKQDSLSPEHLAPSSVRSGTGSNVEPVIPDKRVLNQEIAEGGDVSNSSVITSVTSEVG
SCEDVGNESVAGSSEGNNGSVEGSNNPVSSQSDCCDADSQSLLENRHLDGNGAFQDRVHE
ELEPNAGLGSVLQSTSGIDSETVVQKPVMRLSLTSTA
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgtcgagttcggagagaatgagttcgcctccgccgcctaagcagtacggagtgacgaag
ccaatatcaatggcgggacccacggaggctgatattcaaagaaaccgtgaattagaaaag
tttttggttgaagctgggctttatgaaagcaaagaagaagatgagaagagagaacaggtt
ctgggtcgaattagacagattgctaaagattgggtgaagcaactgactcggttgagggga
tactctgatcaaatggtggaggatgctaatgctctaatctttacttttggatcttaccgg
cttggtgtacatggccctggtgctgacatagatgcattatgtgttggaccgtcctatgtt
agtcgggaggaggacttcttttttattttgcataacatcctggcagaaatggaagaagtt
acagaactgcagcctgttctggatgctcatgttcctgtgatgaaatttaagtttgatgga
ctatcaattgatcttctgtatgcaagtatatctcggttggttgttcgagaagatttggac
atctctgatatgtctgtattgtatgacgttgacgaacctgctggtcggagtcttaatggc
tgccgagttgcagatcaaatactgaagcttgttccaaatgttgagcatttttgcacaacg
ctcagatgtttaaagttttgggcgaaaagacgcggagtttattctaatgtaactggattt
cttggtggcgtgaactgggcacttcttgtggctcgagtttgccagctttacccaaatgca
gttcccagtatgcttgtttcccggttttttagggtttacacaatgtggcgctggcctaac
ccagttatgctatgcacaattgaggaggctgaacttgggttttctgtttgggatccgcgt
aaaaatcgtcgtgataaaactcatcacatgccaattatcacaccagcttatccatgcatg
aattctagctataacgtatcaacaagcaccctacgtgttatggtggatcagttccaatat
ggtaacacaatttgtgaggaagtggagctgaataaagctcagtggagtgctctatttgag
ccatacttgttttttgaaagctacaggaactatctgcaggttgacatagttgcagcaaat
gctgatgacttgcttgcttggaagggttgggtagaatctcggttaaggcaactcactcta
atgattgagcgtgatacgtacgggaagttgcaatgccatccctatcctcatgagtatgta
gatacctccaagccatgtgcccattgcgccttttttatgggtttacaaaggaagccgggg
gaggtagttcaggaaggtcagcagtttgatatacgtggttcggtcgaagaatttaagctt
tcaataaatatgtatatgttttggaagccagggatggaaatctgtgtttctcatattcgt
agaaagcagatacctccttatgtttttccagaaggttataaacggactcggcatccaaga
cttgcatcccagcaacggtctagtgaaaatggtaatgaatatcagactggttctggtctc
aagaggaaaaaagatcctgaatctgtggatcaagatgggccagagaaacgacaatctatt
agccctcagaaacaggattctctttctccggaacatttggctccaagtagtgtgagatct
gggactgggtccaatgtagaaccagtcatcccggataaaagggttttgaatcaggagatt
gctgagggtggggatgtgtcaaattccagtgttatcacatctgttacaagtgaggttggt
tcttgcgaggatgttggcaatgaatcagtagcaggtagcagtgagggaaacaatggtagc
gttgaagggagtaacaacccggtgtcttctcaaagtgattgttgtgatgcagattcacaa
tcgcttttggagaacaggcatctggatggcaatggagcatttcaagacagagtgcatgaa
gagttagagccgaatgccgggcttggaagcgtacttcagtccactagtggaattgactca
gaaactgttgtgcagaaaccagtgatgaggttgagtttgacttcaacggcatga

  All links  
Gene (16)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (7)   
   Pfam (7)   
All databases (30)   

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