KEGG   Citrus sinensis (Valencia orange): 102629709
Entry
102629709         CDS       T02983                                 
Name
(RefSeq) uncharacterized protein LOC102629709
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102629709
Spliceosome [BR:cit03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102629709
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102629709
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 102629709
NCBI-ProteinID: XP_006487141
UniProt: A0ACB8IG47
Position
8:join(4931576..4932682,4932773..4932962,4933075..4933178,4933308..4933410,4933499..4933797,4934553..4934858,4936109..4936486)
AA seq 828 aa
MARRDSSESSDDDRERRCRYSDRKKETRSVGRRDRGDESDNSSDSDPKQHRHERRNERGN
GNSNRPDEERDVSDRREGERDKDKRDLRQDVREESKNDGEEEEGKDGKRVKRDRRDRERE
RGRERGRRDENGEDGFLRKEDCHRRRDLGEDNEREERRKSDRGRDRRRNARDRRRNDDDD
DRKNRDRREIKKDEDGDTKYRRDKEKDRRREESRNKDDSKAVDDSKVKSTRQEGNVNGGD
AALTLGRSGGVYIPPFKLARMMKDVEDKSSAEYQRLTWDALRKSINGLVNKVNATNIKNI
IPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFTAVGELLLKRIVLQL
KRAYKRNDKPQLLAAVKFIAHLVNQQVAHEIIALELLTILLENPTDDSVEVAVGFVKECG
SILQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPELDLVD
IEDQLTHEISLQDEIDPEITLDIFKPDPNFLDNEKRYEDMKKDLLGETSEDEEGSDAGSG
DEDDSEEEEEEEDEEQMKIKDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQ
EMELCIMLLECCSQERTYLRYYGLLGQRFCMINKVHQENFEKCFVQQYSMIHRLETNKLR
NVAKFFAHLLGTHALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTD
PTMQDSFESIFPRDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKQVSESE
PDSESDDESESSDSSDSDTSSSQSKSEDSSSSDESDRDKRRSKRRRRH
NT seq 2487 nt   +upstreamnt  +downstreamnt
atggctagacgagacagtagtgagtctagcgacgatgacagagagagacgatgtcgttat
agtgatagaaaaaaggaaaccagatccgtcggtcgtcgggatcgcggagacgagtcggat
aattcgtctgattctgacccgaaacagcatcgacacgagaggcgcaatgagcgaggcaat
ggtaacagtaatagacctgacgaggagagagatgtaagtgacaggcgtgaaggtgagaga
gacaaggataagcgtgacctgcggcaggatgtaagagaggagagtaagaatgatggggag
gaggaggaggggaaggatggcaagcgtgtgaaaagagaccgaagagatagggaaagggag
cgggggagagagagagggcggcgagatgagaatggagaggatggttttttaagaaaggag
gactgtcatagacgtagggatttaggagaggacaatgagagggaagaacgtaggaaatca
gatagaggaagggataggaggcgtaatgctcgtgataggagacgcaatgatgatgatgat
gatcgaaaaaatagggataggagagagataaagaaagatgaggatggtgatacaaaatac
aggagagacaaggagaaggatagaagacgggaagaaagtcggaataaggatgatagtaag
gcagtggatgattcgaaagttaaaagcacgaggcaagagggtaatgtgaatggtggtgat
gcagcattgaccttgggtaggagtggaggggtttatattccgccttttaagttggcacgg
atgatgaaagatgtggaagataaaagcagtgctgagtatcagcgtttgacatgggatgcc
cttcgtaagagtattaatgggcttgttaacaaggtcaatgcaactaatattaagaatatt
attcctgagctttttgcggagaatctcattcgaggaaggggtcttttctgccgatcttgt
atgaaatcgcaaatggcatcgccgggtttcacagatgtgtttgcggctttggtagctgtt
gtcaacaccaagtttacggcagtgggtgaactcttactgaaaagaatagttttgcagctt
aaaagagcttataagcggaatgacaagccacaattgctagcagctgttaaatttatagcg
catttagtaaaccaacaagtggctcatgagattatcgctttagagctgctcacgattttg
ctggagaatcctactgatgatagtgttgaagtagctgttggctttgttaaagagtgtgga
tcgatactacaggatctttcaccaaagggacttcatggtatttttgagcggtttcgtgga
attctacatgaaggagagatagacaaacgagttcaatttttgattgaaggcctgtttgcc
ataaggaaagcaaaatttcagggttaccccgctgttcgtccagagctggatcttgttgat
attgaggatcaattgactcatgagatatcgcttcaagatgaaattgatccggagattacc
cttgatatcttcaaaccggatcctaacttcttggacaatgaaaaacgctatgaagatatg
aagaaagacctccttggtgagacatctgaggatgaagaaggatctgatgcaggttcaggg
gatgaggatgattccgaagaagaagaagaagaagaagatgaggaacagatgaagataaaa
gatgaaacagaaacaaaccttgtaaatcttcgaaggacaatttatctaacaattatgtct
agtgtagattttgaagaggccggccacaaactactgaaaattaaactggagccaggtcaa
gagatggagttgtgtattatgcttttggagtgttgcagtcaggagagaacttatcttcgg
tattatggattattggggcaacggttctgcatgataaacaaagtccatcaagaaaatttt
gagaaatgcttcgtccagcaatattctatgattcatcgacttgaaaccaataaattacgt
aatgtggccaaattttttgctcatttacttggaacccatgctctgccttggcatgtttta
gcttacatacggttaacagaggaggacaccacttcatcttcccgtattttcataaagatt
ctcttccaggaactgtcggagcatcttggtatccgtttgctcaatgagcggctcacagat
ccaacaatgcaagactcatttgaatccatttttccgagggacaatcccaagaacactcga
tttgccatcaattttttcacatcaattggacttggtggtatcactgagaatttacgtgaa
tacctgaagaacatgccacggcttatcatgcaacaacaaaaacaagtatctgagtcagag
ccggattcagaatcagatgatgaatctgagagctctgattcatccgactcagacacatct
agctcacagtctaagtcggaggattcatcaagttctgatgaaagcgaccgagacaaaaga
cgcagtaagcgaaggagaagacactga

  All links  
Gene (38)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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