KEGG   Carettochelys insculpta (pitted-shelled turtle): 142024500
Entry
142024500         CDS       T11194                                 
Symbol
AP2A1
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X1
  KO
K11824  AP-2 complex subunit alpha
Organism
ciz  Carettochelys insculpta (pitted-shelled turtle)
Pathway
ciz04142  Lysosome biogenesis
ciz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ciz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142024500 (AP2A1)
   04142 Lysosome biogenesis
    142024500 (AP2A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ciz04131]
    142024500 (AP2A1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ciz04147]
    142024500 (AP2A1)
Membrane trafficking [BR:ciz04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    142024500 (AP2A1)
Exosome [BR:ciz04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   142024500 (AP2A1)
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 HEAT_GCN1 HEAT_2 RIX1 HEAT_MROH2B_1st TOR1L1_N DUF4003
Other DBs
NCBI-GeneID: 142024500
NCBI-ProteinID: XP_074872660
Position
22:14071247..14083448
AA seq 958 aa
MPAVSKGDGMRGLAVFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVC
KLLFIFLLGHDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLVNSNSELIRLINNAIKNDL
ASRNPTFMCLALHCIANVGSREMAEAFASEVPRVLVAGDTMDSVKQSAALCLLRLYKTSP
DLVPMGEWTSRVVHLLNDQHMGVVTAAVSLITCLCKKNPDDFKTCVSLAVSRLSRIVSSA
STDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDAAVKGRLVECLETVLNKAQEPPKSKKV
QHSNAKNAILFECISLIIHYDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE
FSHEAVKTHIETVINALKTERDVSVRQRAADLLYAMCDRTNAKQIVSEMLSYLETADYSI
REEIVLKVAILAEKYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAA
KTVFEALQAPACHENMVKVGGYILGEFGNLIAGDPRSSPLVQFNLLHSKFHLCSVATRAL
LLSTYIKFINLFPETKGTIQEVLRSDSQIRNADVELQQRAVEYLKLSSIASTDVLATVLE
EMPPFPERESSILAKLKKKKGPGAGSELDEGRKEPGAELNGGVEPTASTTSTPSPSADLL
GLRAGPPPSATAPPSTGNLLVDVFSDSPSAVPGLAPAAEDNFLSSGAAASSEDPALPISE
ADELLNKFVCKNNGVLFENQLLQIGVKSEFRQNLGRMYLFYGNKTSVQFQNFTPTVTYPG
ELQSQLNLQTKAVDPLVEGGAQVQQVLNIECLSDFTLAPLLNIKFRYGGTLQSITLKLPI
TLNKFFQATEMLSQDFFQRWKQLSQPQQEAQKIFKANHPMDPEVTKAKLLGFGCALLDKV
DPNPDNFVGAGIIQSKSLQVGCLLRLEPNAQAQMYRLTLRTSRETVSRHLCGLLAEQF
NT seq 2877 nt   +upstreamnt  +downstreamnt
atgccggcggtgtccaagggggacgggatgcgcggcctggcggtcttcatctcggacatc
cgcaactgtaaaagcaaagaggccgaaatcaagaggatcaacaaggagctggcgaacatc
cggtccaaattcaagggggacaaggctctggacgggtacagcaagaagaagtatgtatgc
aagctgctgttcatcttcctcttgggtcacgacatcgacttcgggcacatggaggccgtc
aacctgctgagctccaacaagtacacagagaagcagattggctacctcttcatctcggtg
ctggtgaactccaacagcgagctgatccgcctcatcaacaacgccatcaagaacgacctg
gcgagccgcaaccccaccttcatgtgcctggcgctgcactgcatcgccaacgtggggagc
cgcgagatggccgaggccttcgcctccgaggtgccccgtgtgctggtggctggggacacc
atggacagcgtcaagcagagcgcagccctctgcctcctgcgtctctacaagacctcgccc
gacctggtgcccatgggcgagtggacctcccgcgtggtgcacctgctcaacgaccagcac
atgggtgtggtcacggcggccgtcagcctcatcacctgcctctgcaagaagaaccctgac
gacttcaagacgtgcgtctccctggctgtgtccaggctgagccggatcgtctcgtcggcg
tccacggacctgcaggattacacctactacttcgtgccggccccatggctctcagtgaag
ctcctgcgcttgctgcagtgctaccccccaccagaggatgcggcagtgaaggggcgccta
gtcgagtgcctggagacggtcctcaacaaggcgcaggagccccccaagtccaagaaggtt
cagcattccaacgcgaagaacgccatcctcttcgagtgcatcagcctcatcatccactac
gacagcgagcccaacctgctggtgcgggcctgtaaccagctgggccagttcctgcagcac
cgggagaccaacctgcggtacctggcgctggagagcatgtgcaccctggccagctccgag
ttctcccacgaggccgtcaagacccacatcgagacggtcatcaacgccctcaagacggag
cgggatgtgagcgtgcggcagcgtgcggccgacctgctctacgccatgtgcgatcgcact
aatgccaagcagatcgtgtcggagatgctcagctacctggagacggctgattactccatc
cgcgaggagattgtgctgaaggtggccatcctggcggagaagtacgcggtggattacagc
tggtacgtggacacgatcctcaacctgatccgcatcgcgggcgactacgtgagcgaggag
gtctggtaccgcgtcatccagatcgtcatcaaccgggacgacgtgcagggctacgccgcc
aagaccgtcttcgaggccctgcaggctcccgcctgccacgagaacatggtgaaggttggg
ggctacatcctgggggagttcgggaacctcatcgctggagacccccgctccagccccctg
gtgcagttcaacttgctgcactccaagttccacctgtgcagcgtggccacgcgggccctg
ctcctctccacctacatcaagttcatcaacctcttccccgagaccaagggcaccatccag
gaggtgctgcgctctgacagccagatccgcaacgccgacgtggagctgcaacagcgcgcc
gtggagtacctgaagctcagctccatcgccagcaccgacgtcctggccacagtgctggag
gagatgccgcccttcccggagcgcgagtcatccatcctggccaagctgaagaagaagaag
ggtcctggggccggcagcgagctggacgaggggaggaaagagccaggagcggagctcaac
gggggcgtggagcccacagccagcaccacctccaccccctcgccatcagctgatttactg
gggctccgggcaggcccgccccccagcgccaccgccccccccagcaccgggaacctgctg
gtggacgtcttctctgacagcccgtctgctgtgcccggcctggcgccggccgccgaggac
aacttcctcagctcgggtgcggctgcttcctccgaggaccccgctttgcctatctctgaa
gctgatgagctgctaaacaagttcgtgtgtaagaataacggggtgctctttgagaaccag
ctgctgcagattggggtgaaatctgagttccgccagaacctcggccggatgtacctgttc
tacgggaacaagacgtcggttcagttccagaatttcaccccgacggtcacctaccccggg
gagctgcagagccagctgaacctgcagacgaaggcggtggacccgctggtggagggcggc
gcccaggtgcagcaggtgctgaacatcgagtgtctgagcgacttcaccctcgccccactg
ctcaacatcaagttcaggtacgggggcacactgcagagcatcaccctgaagctgcccatc
accctgaacaagttcttccaggccaccgagatgctgtcgcaggatttcttccagcgctgg
aaacagctcagccagccgcagcaggaagcccagaagatcttcaaggcaaatcaccccatg
gaccctgaggtgaccaaggccaagctgctgggcttcggctgtgccctgctggacaaggtg
gaccccaaccccgataacttcgtgggggccggcatcatccagagcaagtcactgcaggtc
ggctgcctgctgcgcttggagcccaacgcccaggcccagatgtaccgcctgacactgcgc
accagccgggagacggtctcccggcacctttgcgggctgctggccgagcagttctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (16)   

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