KEGG   Cryptomeria japonica (Japanese cedar): 131080005
Entry
131080005         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131080005
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131080005
Spliceosome [BR:cjf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    131080005
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    131080005
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 131080005
NCBI-ProteinID: XP_057874037
Position
3:359707900..359711543
AA seq 760 aa
MSTSGRHGGRRSSGKQFSEGEISSEEDRKQKISGDEKHVTDRRNTPIDGDNANVRVYHEE
HSNERDHGKRHRTDSVKSHADRRDRGKDRTREHEGNHGRRRSLSGNKRDRKAVEVNISGF
VSASAQNENGEGVVRGTEKGVGRSGGAYIPPFKLAQMMKDVQDKSSVEYQRMTWDALRKS
INGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSLMKSQMASPGFTDVFAALIAVVNTK
FPEVDNLLLRRIILQLKRAYKRNAKHTLIVAAKFIAHLVNQQVAHEIIALELLTLLLENP
TDDSVEVAVGFVKECGSLLQDLSPKGLYGIFERFRGILHEGEIDKRVQFLIEGLFAIRKA
KFEGHPAVRAELDLVEQEDQLTHEVFLEDELDQEAGLDVFKPDPEFLEHETAYEKLKKDI
LGDASLDEPEGENDSGDQSDDDDDDDEEEVEEALRIQDETETNLVNLRRTIYLTIMSSFD
FEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIYQEFFDKC
FVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHCLAYIRLTEEDTTSSSRILIKILFQ
ELAEQLGIVLLNERLNDPTMQESYDSIFPKDNPKNSRFAINFFTSIGLGGITESLREHLK
NMPRLIMQQQKSIPESDESISNDDSSSSSGSLDSDTSESDSESETDSERRKEQTRKKNIS
KHNTEYEKTRIKKRARTSDSENENESNSDSDINKRKTKRK
NT seq 2283 nt   +upstreamnt  +downstreamnt
atgagtaccagtggaagacatggcggaagacggtcatctgggaaacagttttcagaggga
gaaatctcgtcagaagaagacagaaagcaaaagattagcggggatgagaagcatgtaacg
gataggagaaatacgcctattgacggagataatgctaacgttagggtttatcacgaggaa
catagcaatgagagggatcacggcaaaaggcatcgaacagacagtgtcaaatcccacgct
gacaggagagacagaggcaaagacagaacccgcgagcatgaggggaatcatggtcgtagg
agaagtttgtcaggaaacaagagggacagaaaagctgtggaagtgaatatttctggtttt
gtctcagcttcagctcagaatgagaatggtgaaggtgttgttagagggactgagaagggt
gttggaagaagtgggggcgcttacattcccccattcaaactggcccaaatgatgaaagat
gtacaagacaagagcagtgtggaataccagcgcatgacttgggatgcccttcgaaagagt
atcaatggtttagtaaacaaggtgaatgcatccaacatcaagaacatcattccagagctg
ttcgcagagaatctcatccgtggaaggggtctattttgtaggtctcttatgaaatcccaa
atggcatcccctggatttacggatgtttttgcagccttgattgctgtggtaaatacgaag
tttcctgaagttgacaatttgcttttgcgaagaattattttgcagctcaaaagggcatat
aaacgcaatgctaagcacacgttgattgtagcagcaaaattcatagctcatttagtgaat
caacaagttgcacatgagatcattgccttggaacttctcacccttttactagagaatcct
acagatgatagtgtagaggttgctgttgggtttgtgaaagagtgtgggtctttgctgcaa
gacctttcgccgaaaggtctttatgggatctttgaacgatttagaggtattctccatgag
ggggaaattgacaagcgagtacagtttctgattgaaggtctttttgcaattcgcaaagct
aagtttgagggtcacccggctgtgcgtgcagaattggaccttgtagagcaagaagatcag
ttaacgcatgaagtttttctagaagacgaacttgatcaagaagctggtttggatgttttc
aagccagatcctgagttcttagaacatgagacagcctatgaaaaactaaagaaagatatc
ctcggagatgcttctttggatgaaccagaaggggagaatgattcaggtgatcagtcagat
gatgatgatgatgatgatgaagaggaagtggaggaagcactaagaatacaggatgagaca
gagacgaacttggtcaatttaaggcgcacaatttacttgacaatcatgtcgagttttgat
tttgaggaagctggtcataagctactaaagatcaagcttgaacctggtcaagagatggag
ttgtgtatcatgctattagagtgctgcagtcaagagagaacataccttcgttattatggt
cttcttggtcaaagattctgtatgataaacaaaatttatcaggaattttttgataagtgt
tttgtacaacagtattctatgatccacaggctggaaacgaataaactacgtaatgttgca
aagttttttgcccacttgcttggcacggatgctcttccatggcattgtcttgcatatata
cgtctgacagaggaggatactacttcatcttcccgtatcttaataaagattctcttccag
gagttggcagagcagcttggtatagtgttgcttaatgagaggttaaatgatccgacaatg
caagagtcctatgattcaattttccctaaggacaatcccaaaaattcacggtttgctatc
aatttcttcacttccatcggtcttggtggtatcactgagagtttacgggagcatttgaag
aatatgccaaggcttataatgcagcagcaaaagtctatccccgagtcagatgaatcgatc
tctaatgacgattcttctagttcatcaggctcgctggattccgatacatcagagtcagat
tctgagagtgaaacagacagtgagaggaggaaggagcaaacaagaaagaaaaacatttca
aagcataatactgagtatgagaaaacaagaataaagaaaagggctaggacatctgattca
gagaatgaaaatgagagtaacagcgacagtgacataaacaaaaggaaaactaaaaggaaa
taa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system