KEGG   Cryptomeria japonica (Japanese cedar): 131857976
Entry
131857976         CDS       T10556                                 
Name
(RefSeq) uncharacterized protein LOC131857976
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cjf  Cryptomeria japonica (Japanese cedar)
Brite
KEGG Orthology (KO) [BR:cjf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cjf03041]
    131857976
Spliceosome [BR:cjf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    131857976
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    131857976
SSDB
Motif
Pfam: MA3 MIF4G AcrB_N
Other DBs
NCBI-GeneID: 131857976
NCBI-ProteinID: XP_059066785
Position
8:<575896941..>575898731
AA seq 597 aa
RSGGVYIPPFKLAQMMKDVEEKSSVEYQHMTWDALQKSINGLVNKVNASNIKNIIPELFA
ENLIRGRGLFCRSCMKSQMASPGFTDVFAVLVAVVNTKFPKVGNLLLRRIILQLKRAYKC
NDKHMLIAAAKFIAHLVNQQVAHEIIALELLTLLLENPTDDSVEVVVGFMKECGSLLQDL
SPKGLYGIFERFKGVLHEGEIDKRVQFLIEGLFAIHKAKFEDHPVVHPKLDLVEQEDQLT
HEVFLEDELDQEAGLDVFKPDHDFLENEATYEKLKKDILGDASSDEAEGENDSGDDSDDD
DDDEEEGEEALRIQDETETNLVNLRGTIYLTIMSSVDFEEAGHKLLKIKLEPGQQMELCI
MLLECCSEERTYLRYYGLLGQRFCMINKIYQEFFDKCFVQQYSMMHKLETNKLRNVAKFF
AHLLGTDALPWHCLAYIRLTEDDTTSSSRIFIKILYQELAKQLGILLLNERLNDPTMQES
FDSIFPKDNPKNSQFAINLFTSIGLGGITESLREYLKNMPRLIMQQQKSIPESDESTSND
NSSSSSGSSNPDTSYSDSKSETDSESSKETPRKKNNSKHDNEYEKTRRKKRARASDS
NT seq 1791 nt   +upstreamnt  +downstreamnt
agaagtgggggtgtttacattcccccatttaagctagctcaaatgatgaaagatgtggaa
gaaaagagcagtgtggaataccagcacatgacatgggatgcccttcagaagagtatcaat
gggttagtaaacaaggtaaatgcatctaacatcaagaatatcattccagagttgtttgca
gagaatctcattcgtgggaggggtctattttgtaggtcttgtatgaaatcccaaatggca
tcccctggatttacagatgtttttgctgtgttggttgctgtggtaaatacaaaatttcct
aaagttggcaatctacttttgcgaagaattattttgcagcttaagagggcatacaaatgc
aatgacaagcacatgttgatagcagcagccaaattcatagctcatttagtgaatcaacaa
gttgcacatgagatcattgccttggaacttctcacccttttactagagaaccccacagat
gacagtgtagaagttgttgttgggttcatgaaagaatgtggttctttgttgcaagacctt
tcacccaaaggtctctatgggatttttgaaagatttaaaggtgttctccatgagggggaa
attgacaaacgagtacaatttttaattgaaggcctttttgcaattcacaaagctaagttc
gaggatcatccagttgtgcatccaaaattggaccttgtagagcaagaagatcagttaaca
catgaagttttcctagaagatgaacttgatcaagaagctggtttggatgttttcaagcca
gatcatgatttcttagagaatgaggcaacctatgaaaaactgaagaaagatatccttgga
gatgcttcttcagatgaagcagaaggggagaatgattcaggtgatgattcagatgatgat
gatgatgatgaagaggaaggtgaggaagcactgagaatacaagatgagacagagacaaac
ttggtgaatttaagaggtacaatttatttgacaatcatgtcaagtgttgattttgaggaa
gctggtcataagctactaaagatcaagcttgaacctggtcaacagatggaattatgcatc
atgttgttagaatgctgtagtgaagagagaacataccttcgttattatggtcttcttggg
caaagattttgtatgatcaataaaatttatcaggaattttttgataagtgttttgtacaa
cagtattctatgatgcacaaactggaaacaaataaactacgtaatgttgcaaagtttttt
gcgcacttacttggcacagatgctcttccatggcattgtcttgcttatatacgtttgaca
gaggatgatactacttcctcttcccgtatttttataaagattctctaccaggagctggca
aagcagcttggtatattgttgcttaatgaaaggttgaacgatccaacaatgcaggagtct
tttgattcaatttttccaaaggacaatcccaaaaattcacagtttgctatcaatttattt
acttctattggtcttggtggtatcactgagagtttacgtgagtatttgaagaatatgcca
aggcttataatgcagcagcaaaagtctattcctgagtcagatgaatctacctctaatgac
aattcttctagttcatctggttcgtcaaatcctgatacatcatactcagattctaagagt
gaaactgacagtgagagtagtaaggagacaccaagaaagaaaaataattcaaagcatgac
aatgagtatgaaaaaacaagaagaaagaaaagggcgagggcatctgactca

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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