KEGG   Coturnix japonica (Japanese quail): 107315190
Entry
107315190         CDS       T04297                                 
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
cjo  Coturnix japonica (Japanese quail)
Pathway
cjo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:cjo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107315190
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cjo03019]
    107315190
Enzymes [BR:cjo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107315190
Messenger RNA biogenesis [BR:cjo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     107315190
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central RMD6 DUF4269
Other DBs
NCBI-GeneID: 107315190
NCBI-ProteinID: XP_015720738
Position
5
AA seq 742 aa
MIQLIFCPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEE
LQRRILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDAL
CVAPRHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQT
IPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIY
SNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNL
PVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAE
WSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVN
PQSFPAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMF
EMDMKIAARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVPS
PTSAMKTSPLNSSGSSQGRSSPAPAVTAASVTNIQASEVTVPQTNSSESSGGSSNESIPQ
TATQPAISPPPKPTISRIASSTHLLNPSPRISGNVATKTPSPVTAVKRTSSPHKEDSPKK
MKIEEQDEISEATSCIDVNEHERMETKELLETEVSVNTQMEHLQTTLQAPQKTPSTDLSD
IPALPANPIPVIKNSIKLRLNR
NT seq 2229 nt   +upstreamnt  +downstreamnt
atgatccagttgattttctgtcctgttacaacccagggatcacaaacacagcaactgcag
aagcattatggcattacctcacctatcagtttagctgcccccaaggagtttgactgcatg
cttacccagaaattgattgaaacccttaaaccctacggtgtttttgaagaggaagaagaa
ctgcagcgcaggattttaattttgggaaaactaaataacctggtaaaggaatggatccgg
gaaatcagtgaaagcaagaatcttccacagtctgtaatagaaaatgttggaggaaaaatt
tttacatttggatcctatagattaggggtccatacaaaaggtgctgatattgatgccctg
tgtgttgcaccaagacatgttgaaagaagtgattttttcacatcattttatgaaaaactg
aaacagcaagaagaagtgaaagatttgagggctgttgaagaagcttttgtcccagttatt
aaactatgttttgatggaatagagattgatattttgtttgcaagattagcgctgcaaact
atacctgaggacttagacctccgagatgatagcctacttaaaaatttagacattagatgc
atacgaagtcttaatggttgccgggtaaccgatgaaattctgcatctagtaccaaacatt
gacaacttcaggttaacactgagagctatcaaactgtgggcaaaacgccacaacatctat
tccaatatactaggtttccttggcggtgtgtcctgggctatgctagtagcaagaacttgc
cagctttatccaaatgcaatagcatcaactcttgtacataaatttttcttggtgttttct
aaatgggaatggccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttg
cctgtatgggacccaagggtaaaccccagtgataggtaccatcttatgcctataattaca
ccagcatacccacagcagaactctacctacaatgtgtccgtttccacacggatggtcatg
gttgaggaatttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagag
tggtccaaactttttgaagctccaaacttctttcaaaagtacaagcattatattgtgctt
ctagcaagtgcaccgacagaaaaacaacgactagaatgggtgggtttggtggaatcaaaa
atccgtattctagttggaaacctggagaaaaacgagttcattacactggctcatgtgaat
ccacagtcattcccagcacccaaggagaatcctgacaaggaagaataccgtacaatgtgg
gtgattgggttggtgttcaagaaaactgaaaattctgaaaatttaagtgttgatcttact
tacgacatccagtcttttacagatacagtttataggcaagcaataaacagcaagatgttt
gagatggatatgaagattgctgcaaggcatgtgaagcgtaagcaacttcaccaactgcta
cctaatcatgtgcttcagaaaaagaaaaagcattcaacagaaggagtcagactgacagct
ctgaatgacagcagcctagacttgtctatggacagtgataacagcacgtctgtgccttcg
cctactagtgctatgaagacgagtccattgaacagttctggaagttctcagggcagaagc
agtcctgcgccagctgtaacagcagcatctgtgaccaacatacaggcttctgaagtcact
gtgccacaaacaaattccagtgaaagctcagggggttcttcaaatgaaagcattcctcaa
actgccacacaaccagccatttctccaccaccaaagcctaccatctctagaattgcttcc
tcaacacatctattaaatccatcacccagaatttcaggaaacgttgcaacaaaaacgcct
agccctgtcacagcagtgaaaaggacatcttctccccataaagaagattctcccaagaaa
atgaaaattgaagagcaggatgaaataagtgaagctactagctgtatagatgtgaacgag
catgaaagaatggaaacgaaggagctattggagacggaagtgagtgttaatacccaaatg
gaacatcttcagacaactttgcaagctcctcagaaaacacccagtacagatctttccgat
atccctgctctccctgcaaatcctattcctgttatcaagaattcaataaaattgagattg
aaccggtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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