KEGG   Caldicellulosiruptor morganii: OTK00_002017
Entry
OTK00_002017      CDS       T08774                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
cmor  Caldicellulosiruptor morganii
Brite
KEGG Orthology (KO) [BR:cmor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmor03032]
    OTK00_002017
   03036 Chromosome and associated proteins [BR:cmor03036]
    OTK00_002017
   03400 DNA repair and recombination proteins [BR:cmor03400]
    OTK00_002017
DNA replication proteins [BR:cmor03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    OTK00_002017
Chromosome and associated proteins [BR:cmor03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    OTK00_002017
DNA repair and recombination proteins [BR:cmor03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      OTK00_002017
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-DNA_bdg NNH1 HTH_78 DUF2267 Lmo2446-like_N
Other DBs
NCBI-ProteinID: WAM33510
UniProt: A0ABY7BP24
Position
complement(2006251..2006526)
AA seq 91 aa
MNKTDLISAMAEKSGLTKKDAEKALNAFVDAVTEALSKGEKVQLVGFGSFEVRERAERVG
RNPQTQEEIKIPATKVPVFKAGKMLKDAVAK
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaagacagatttgatttcagcaatggcagaaaagagcgggcttaccaaaaaggac
gcagaaaaggcactcaatgcgtttgtagacgctgttacagaagcactctccaagggggaa
aaggttcaacttgttggttttggttcatttgaggtaagagaaagagcagagagggttgga
agaaatccacagactcaagaagagattaagattccagcaacaaaagttcctgtattcaag
gcaggcaagatgttaaaagatgctgttgcaaagtaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (12)   

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