KEGG   Caldicellulosiruptor naganoensis: OTJ99_000485
Entry
OTJ99_000485      CDS       T08720                                 
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
cnag  Caldicellulosiruptor naganoensis
Brite
KEGG Orthology (KO) [BR:cnag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnag03019]
    OTJ99_000485 (rapZ)
Messenger RNA biogenesis [BR:cnag03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     OTJ99_000485 (rapZ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_23 AAA_24 SKI AAA_22 CoaE AAA_16
Other DBs
NCBI-ProteinID: WAM31995
Position
526521..527393
AA seq 290 aa
METVVITGMSGAGKSLAIRAFEDMGFFCIDNLPPQFLPKIAELASATKDKISKVAAVVDI
RGGELFDDFKDVLNELKKGTYNFKLLFLDAHDNVLIQRYKETRRKHPLSLESEGSILEAI
QKEREKLEDIKRYADFIIDTSTLSPKELKEKLFEIFSAQKSQETMLITIMSFGFKYGLPL
DADLVFDVRFIPNPFYIDELKHKTGKEKEVKEYVLRWDVTKKFLDKLFDLILFLIPNYAE
EGKGQLVIAIGCTGGKHRSVTIAEELFELIKNKGYRTSIFHRDIEKDIKG
NT seq 873 nt   +upstreamnt  +downstreamnt
ttggagacagtagtgattacaggcatgtctggtgcaggaaaaagcttagcaattagggca
tttgaggatatgggatttttttgtatagacaaccttccaccacagtttttaccaaagatt
gctgagcttgcaagtgcaacgaaggacaaaatttcaaaggttgcagctgttgttgacatt
cgtgggggagagctttttgacgattttaaagatgttttgaatgaactcaaaaaagggaca
tacaattttaagctcctttttttagatgcgcatgacaatgtgcttatccaaagatataaa
gagacaaggcgaaagcatccattgagtttagaaagtgagggcagcatattagaagcaatt
cagaaagagagagaaaagcttgaggatataaaaagatatgcagattttataattgatacc
tctactctttcaccaaaagagctaaaagaaaagctttttgagattttttctgctcaaaaa
tctcaagagacaatgctaataaccattatgtcatttggatttaagtacgggcttccattg
gacgctgatttagtgtttgatgtgagattcatccccaatcctttttatatagatgaactg
aaacacaagacaggtaaagaaaaagaggtcaaagaatatgtgctgagatgggatgtgaca
aagaagtttttggataagcttttcgatttaattttattcttaataccaaattatgccgaa
gaaggtaaaggacagcttgtgattgcgattggctgcactggtggtaagcaccgctctgtt
acaatagctgaagagctttttgagcttatcaaaaacaagggatatagaacatcaattttt
catagagatatagagaaagatataaaagggtga

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