KEGG   Cryptococcus deneoformans B-3501A: CNBD5080
Entry
CNBD5080          CDS       T01040                                 
Name
(RefSeq) hypothetical protein
  KO
K12877  protein mago nashi
Organism
cnb  Cryptococcus deneoformans B-3501A
Pathway
cnb03013  Nucleocytoplasmic transport
cnb03015  mRNA surveillance pathway
cnb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cnb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNBD5080
  09122 Translation
   03013 Nucleocytoplasmic transport
    CNBD5080
   03015 mRNA surveillance pathway
    CNBD5080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnb03019]
    CNBD5080
   03041 Spliceosome [BR:cnb03041]
    CNBD5080
Messenger RNA biogenesis [BR:cnb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     CNBD5080
Spliceosome [BR:cnb03041]
 Complex C
  Other components
   EJC/TREX
    CNBD5080
SSDB
Motif
Pfam: Mago_nashi TM1586_NiRdase
Other DBs
NCBI-GeneID: 4935897
NCBI-ProteinID: XP_775779
Position
4:1441083..1442200
AA seq 194 aa
MSTEDLLKDKFYLRYYTGHQGAHGHEFLEFEYSYGRIRYANNSNYRNDSLIRKESTWCFT
SAGLEKGIEKKKKEFVKVVGWKGKQIEAWQLRIVEAVFVSPAVVDELKRIVRESEITKED
DVAWPRKNVVGKQELEVRIDKEHISFETAKIGALAEVNDSSDPDGLRVFYYLIQDLKCFI
FALIQMHFKIKPKR
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcaacagaagaccttttgaaagacaagttctaccttcgttactacactggtcatcaa
ggtgcacatggacatgagttccttgagttcgaatactcctacggacgtattcgatatgcc
aacaactccaactaccgaaatgacagtcttattcgaaaagagagtacgtggtgttttacg
tctgccgggttggaaaaggggattgagaaaaagaagaaagagtttgtcaaggtggttgga
tggaaggggaagcaaatcgaagcttggcagttgcgaatcgttgaggcggtgttcgtctcc
cccgccgttgtcgacgaattgaagagaattgttcgagagagtgaaatcacaaaagaagat
gatgtggcatggcctaggaagaacgtcgttggaaagcaagaactcgaagtcagaatagat
aaggaacatatctcattcgagactgccaagatcggtgctcttgcggaagtgaatgattct
agtgaccctgatggattacgagtattttactacttgatccaggatcttaaatgtttcatt
tttgccctcattcagatgcacttcaagatcaagcctaaaagatag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

Download RDF
DBGET integrated database retrieval system