KEGG T11056: 135990505

Caloenas nicobarica (Nicobar pigeon): 135990505

Entry

135990505         CDS       T11056

Symbol

CWC22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

cnic Caloenas nicobarica (Nicobar pigeon)

Brite

KEGG Orthology (KO) [BR:cnic00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cnic03041]
    135990505 (CWC22)
Spliceosome [BR:cnic03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    135990505 (CWC22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    135990505 (CWC22)

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

135990505

NCBI-ProteinID:

XP_065494290

Position

6:17033383..17063175

AA seq 917 aa
MKSRVTQVNHGSSYERKENYSSRQRSLSPEDRDEERDRSLSPRKRRHSDDSRYDQEYSRR
EYYDDRTSEGRRMERGRERHYEKWEDRESDRREERESDRRKQRRYSSPDRRSPERSTAQS
SLAHDEATSKKKKEEVDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSI
NGLVNKVNVSNIENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAALVAIINSKF
PNIGELILKRLILNFRKGYRRNDKQLCLTSSKFVAHLMNQNVAHEVLCLEMLTLLLERPT
DDSIEVAIGFIKESGLKLTEVSPRGINAIFDRLRHILHESKIDMRVQYMIEVMFAVRKDG
FKDHPIIPEGLDLVEEEDQFTHMLPLEDDYNPEDVLNVFKMDPNFLENEEKYKMLKKEIL
DEGDSESEADQEAGSSEEDDEDEDEDEDGQKVTVHDKTEINLVSFRRTIYLAIQSSLDFE
ECAHKLLKMDFPESQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFK
EQYDTIHRLETNKLRNVAKMFAHLLYTDAIPWSVLECIILSEETTTSSSRIFVKIFFQEL
SEYMGLPNLNARLKDETLHPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNA
PKMIMTQKQDVESSDSSSSSETDSSSDSDSESSSTSSSDSSSSSDSSSSSDNSSDSDVPK
AKRKRMQKKNKESDKVSRKKQERKRKSLEKKIGRRQQEERSDTESKSERNHRNARESRRR
DDVSKYYHRDESNGRDGYHSGKDRNHERNKDLENKHSNSKPKKAERRASLSDDENYRHWS
KDNGHRSRKRERSKSRERSKSRERIHSNSSPREDDQEDRYRNDSEKHREKHNRYSDQYRE
SRKNEDRRKENSPHRRK

NT seq 2754 nt +upstreamnt +downstreamnt
atgaagagcagggtgacccaagtgaatcatggttccagttatgaaaggaaggaaaactac
agttcacgccaaagaagcttgtctccagaggacagggatgaagaacgtgacaggtctctg
tctcccagaaagagaagacactctgatgacagcagatatgatcaggaatactcaagaagg
gaatactatgatgatagaacttcagaaggaagaaggatggaaaggggaagggagagacac
tatgaaaaatgggaggacagagaatccgatcgaagagaggagagagaatctgatcgaagg
aagcagagaagatattcatcgcctgatcgtaggagtccagagcggtcgacagcccagagc
tcacttgctcatgatgaggccacttcaaagaagaagaaagaagaagtggatcccatcctt
actcgcacaggtggtgcatatattccacctgccaagctcaggatgatgcaagagcaaatc
actgataaaaatagcttggcatatcagaggatgagttgggaagccttgaagaagtcaatc
aatggtcttgtcaataaagtgaacgtttctaatatagaaaatatcattcatgagctcctt
caggaaaatattgttcggggaaggggattgctatctagatccattttgcaagctcagagt
gcctctccaatttttactcatgtttatgcagctcttgtggcaattatcaattcaaagttt
ccaaatattggtgaattgattctcaagaggttgatactaaattttcgcaaaggatatcgc
agaaatgataagcaactctgtctaacatcgtcaaaatttgttgcccatttgatgaatcag
aatgtggctcatgaggttttatgtttggaaatgctcactttgcttctcgaaaggcctact
gatgacagtattgaagtagcaattggatttatcaaagagagcgggctcaagttaacagaa
gtttctcctagaggtattaatgcaatctttgaccgtcttcggcacattctgcatgaatct
aaaattgacatgcgtgtccagtatatgatagaagtcatgtttgccgtacggaaggatggc
ttcaaggatcatccaatcattccagagggattagatctagtggaagaggaggatcagttt
actcatatgttgccattagaagatgactacaacccagaggatgttcttaatgttttcaag
atggatccgaactttttggaaaatgaagagaaatacaaaatgctgaagaaagaaattctt
gatgaaggtgacagtgaatctgaagcagatcaagaggctggaagtagtgaggaagatgat
gaagatgaagacgaggatgaagatggtcagaaagttactgtacatgacaaaacagaaatt
aacttggtctccttccgtcgaacgatttatcttgccattcagtcaagcttagactttgaa
gaatgtgctcacaaactgctgaaaatggactttcctgaaagccagactaaagaactctgc
aatatgatacttgactgctgtgctcagcaaagaacatatgagaaattctttggattgctg
gcagggcgtttctgcatgttaaaaaaagaatatatggaatcctttgaagctattttcaaa
gaacaatatgataccattcatcgtttggaaacaaacaaactgaggaatgttgccaagatg
tttgctcatctgctgtacaccgatgcaattccctggagtgtccttgaatgtataatactg
agtgaagaaactaccacatcctccagtagaatttttgtcaaaatattctttcaagagcta
agtgaatatatgggacttcctaatctaaatgcaagattaaaagatgaaacattgcatcca
ttctttgagggattattgcctcgggataacccaagaaacactcgctttgccatcaatttc
ttcacttctattggacttggaggactaacggatgaattgcgggagcatcttaaaaatgca
ccaaagatgataatgacgcagaaacaagatgttgagtcatcagattcctcatcgtcttca
gaaacagactcttcctcagattctgattctgaaagcagcagcaccagcagctcagattca
tccagcagcagtgattcatcatctagcagtgacaacagtagtgactcagatgttcctaaa
gccaaaagaaagagaatgcaaaagaaaaataaagaatctgataaagtttccaggaaaaaa
caagaaaggaaaaggaaatcacttgaaaagaaaataggaaggaggcagcaagaggaaaga
agtgatactgagagcaaatcagaaagaaatcaccgaaatgcgagagaatcacgcaggaga
gatgatgtatcaaaatattatcacagagatgagtccaatggcagagacggttaccatagt
ggaaaggataggaaccatgaaagaaataaggatctagaaaataaacacagtaattcaaaa
ccgaagaaagcagagcggagagcttctctgtctgatgatgaaaattacagacactggagc
aaagataatggtcatcgcagtagaaaaagagagagatcaaaatccagagaaagatcaaaa
tccagagagagaatccatagtaattcaagtccaagagaggatgatcaagaagacagatac
agaaatgattcagaaaaacaccgagagaagcacaaccgttattctgaccagtacagagaa
tccagaaagaatgaagacaggcgaaaggagaattcaccacacagaagaaaataa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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