KEGG   Caloenas nicobarica (Nicobar pigeon): 135994715
Entry
135994715         CDS       T11056                                 
Symbol
TUBB1
Name
(RefSeq) tubulin beta-1 chain
  KO
K07375  tubulin beta
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04145  Phagocytosis
cnic04517  IgSF CAM signaling
cnic04540  Gap junction
cnic04814  Motor proteins
cnic05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    135994715 (TUBB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    135994715 (TUBB1)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    135994715 (TUBB1)
  09142 Cell motility
   04814 Motor proteins
    135994715 (TUBB1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135994715 (TUBB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cnic03036]
    135994715 (TUBB1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cnic04812]
    135994715 (TUBB1)
   04147 Exosome [BR:cnic04147]
    135994715 (TUBB1)
Chromosome and associated proteins [BR:cnic03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     135994715 (TUBB1)
Cytoskeleton proteins [BR:cnic04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    135994715 (TUBB1)
Exosome [BR:cnic04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   135994715 (TUBB1)
  Exosomal proteins of colorectal cancer cells
   135994715 (TUBB1)
  Exosomal proteins of bladder cancer cells
   135994715 (TUBB1)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 135994715
NCBI-ProteinID: XP_065501584
Position
15:complement(12793937..12798217)
AA seq 449 aa
MREIVHLQIGQCGNQIGAKFWEVISDEHGIDIAGNYRGDASLQLERINVYFNEAYSHKYV
PRSILVDLEPGTMDSVRSSKIGPLFRPDNFIHGNSGAGNNWAKGHYTEGAELIENVMDVV
RNECESCDCLQGFQLIHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNAILSIHQLIENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALSVPELTQQMFDARNMM
AACDPRRGRYLTVACIFRGRMSTREVDEQLLSVQTKNSSYFVEWIPNNVKVAVCDIPPRG
LKMAATFIGNNTAIQELFIRVSEQFSAMFRRKAFLHWYTGEGMDEMEFSEAEGNTNDLVS
EYQQYQDATADVEEYEEVEVEASPEKEAQ
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaaattgtgcatcttcagattggccagtgcgggaaccaaattggagctaagttc
tgggaggtcatcagtgatgagcatggaattgacatcgctggaaactaccgtggggatgca
tcactgcagctcgagcgaattaacgtgtacttcaacgaggcttattcccataaatatgtg
ccccgttctatcttggtggacctggaacctggcacgatggacagtgtacggtcgagcaaa
ataggcccactctttcgacctgacaattttatccacggtaattcaggtgctggaaacaac
tgggctaagggccattacacagaaggtgcggaactgattgaaaatgtcatggatgtggtg
aggaatgagtgtgagagctgtgactgcctgcaaggattccagctcatccattcgcttggt
ggtggtacaggctcaggtatgggcacgctcctcatcaacaaaatcagagaagaatatccc
gacaggattatgaacactttcagtgttgtgccttcacccaaagtatccgacacagtcgta
gagccgtataatgccatcctctccatccatcaactcatagagaatacagatgaaaccttt
tgcattgacaacgaagctctatacgatatatgttttagaactttaaagctcaccaatccc
acctatggtgatctcaaccacttagtgtccctaacaatgagtggtgtcacaacctccctc
cgttttcctggccagctgaacgcagatctgcgaaagctggcggttaacatggtgcccttt
cctcgcctgcatttcttcatgccaggcttcgctccgctgacagctcgaggcagccagcag
tacagagccctctcggtgccagagctcactcaacaaatgtttgatgctcgcaacatgatg
gcagcctgcgaccctcgccgcggacgttacttgaccgtggcatgcatcttcagaggccgg
atgtccaccagagaagtggacgagcagttgctgtctgtccagaccaagaatagctcctac
tttgtggagtggatccctaataatgtcaaagtggctgtgtgtgacataccaccacgagga
ctgaagatggcagctacctttattggcaataacacagccatccaggagctcttcatcagg
gtttctgaacagttctcagcgatgttcagaagaaaagcgttcctccattggtacacgggg
gaaggaatggatgagatggagttttctgaagcagaaggtaacaccaacgaccttgtgtcc
gagtaccagcagtaccaggatgccactgcagatgttgaggaatatgaagaggtagaggtg
gaagccagcccagaaaaggaagcacagtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (9)   

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