KEGG   Caloenas nicobarica (Nicobar pigeon): 136000816
Entry
136000816         CDS       T11056                                 
Symbol
TUBB
Name
(RefSeq) tubulin beta chain
  KO
K07375  tubulin beta
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04145  Phagocytosis
cnic04517  IgSF CAM signaling
cnic04540  Gap junction
cnic04814  Motor proteins
cnic05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    136000816 (TUBB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    136000816 (TUBB)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    136000816 (TUBB)
  09142 Cell motility
   04814 Motor proteins
    136000816 (TUBB)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    136000816 (TUBB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cnic03036]
    136000816 (TUBB)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cnic04812]
    136000816 (TUBB)
   04147 Exosome [BR:cnic04147]
    136000816 (TUBB)
Chromosome and associated proteins [BR:cnic03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     136000816 (TUBB)
Cytoskeleton proteins [BR:cnic04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    136000816 (TUBB)
Exosome [BR:cnic04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136000816 (TUBB)
  Exosomal proteins of colorectal cancer cells
   136000816 (TUBB)
  Exosomal proteins of bladder cancer cells
   136000816 (TUBB)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 136000816
NCBI-ProteinID: XP_065510876
Position
35:complement(298333..305909)
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEEDFGEEAEEEA
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggagatcgtccacatccaggcgggacaatgcggcaaccagatcggggccaagttc
tgggaggtgatcagcgacgagcatgggatcgacccgactggcacctaccacggggacagc
gacctgcagctcgaccgcatcagcgtctactacaatgaggccactgggggtaaatacgtc
cccagggccatcctggtggaccttgagccggggaccatggactcggtgcgatcggggccc
ttcgggcagatcttccggcccgacaacttcgtcttcggccagagcggcgccggcaacaat
tgggccaagggccactacacggaaggcgccgaactggtggactcggtcctggacgtcgtg
cgcaaagaggcggaaagttgcgattgtctccagggcttccagttgacccactcactgggc
ggcggcaccggctcggggatggggacgctgctcatctccaaaatccgcgaggaatatccc
gaccgcatcatgaacaccttcagcgtcgtcccgtcgccgaaggtctcggacacggtggtg
gaaccgtacaacgccaccctgtctgtccatcagttggtggagaacacggatgagacttac
tgcattgacaacgaggcgctttacgacatttgcttccgcaccttgaagctgaccacgccg
acctacggcgacctcaaccacctcgtctcggccaccatgagcggcgtcaccacctgcttg
aggttccccggtcagctcaacgccgatctccgcaagctggccgtcaatatggttccgttc
ccgcgtctccacttcttcatgccgggtttcgcgccgctcacgtcgcgcgggagccaacag
taccgagccctcaccgtccccgagctcacccagcaggtgttcgacgccaagaacatgatg
gccgcctgcgacccgcgccacgggcgctacctcactgtggccgccgtcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagctcgtac
ttcgtggagtggatccccaacaacgtcaagacggctgtgtgcgacatcccgccccgcggg
ctcaagatggctgtcaccttcatcgggaacagcacggccatccaggagctgttcaagagg
atctcggagcagttcacagccatgttccgccgcaaggccttcctgcactggtacacgggc
gaggggatggacgagatggagttcaccgaggccgagagcaacatgaacgacctagtgtcc
gagtaccagcagtaccaggacgccacggccgaggaggaggaggattttggggaggaggct
gaagaggaggcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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