Chryseobacterium nakagawai: EG343_19630 Help Entry EG343_19630       CDS       T06300                                  Symbol ligA Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism cnk  Chryseobacterium nakagawai Pathway cnk03030   DNA replication cnk03410   Base excision repair cnk03420   Nucleotide excision repair cnk03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cnk00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     EG343_19630 (ligA)    03410 Base excision repair     EG343_19630 (ligA)    03420 Nucleotide excision repair     EG343_19630 (ligA)    03430 Mismatch repair     EG343_19630 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cnk03032]     EG343_19630 (ligA)    03400 DNA repair and recombination proteins [BR:cnk03400]     EG343_19630 (ligA) Enzymes [BR:cnk01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      EG343_19630 (ligA) DNA replication proteins [BR:cnk03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      EG343_19630 (ligA) DNA repair and recombination proteins [BR:cnk03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      EG343_19630 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      EG343_19630 (ligA)    MMR (mismatch excision repair)     DNA ligase      EG343_19630 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       EG343_19630 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH 5_3_exonuc RNA_lig_T4_1 DUF7575 Zn_ribbon_3 zf-IS66 A2L_zn_ribbon Motif Other DBs NCBI-ProteinID:  AZA92647 UniProt:  A0AAD0YMM7 Position complement(4305583..4307589) Genome browser AA seq 668 aa AA seqDB search MSENIQQKIEQLRKELHQHNESYYLLDTPTVTDYEFDMLLEELQDLEAKHPEFYDENSPT MRVGGGITKVFPTIQHKFRMYSLDNSYDFDDLEDWEKRIIKTIDGPVEFVAELKYDGASI SILYENGKLTQAVTRGDGFQGDEITPNVRTISDIPLTLKGDFPSQFFMRGEIYLTRKNFD KLNKLREEEGLDPFMNPRNTASGSLKMQDSAEVRKRSLSSVLYQFISEDIPAETHWELLQ KAQGWGFKTSQQAKLCKTLDEVKEFITFWDTERHNLPFEIDGIVLKVNSLQQQRQLGYTA KSPRWAMAYKFKAEKVETELQSVSYQVGRTGAITPVANLKPVLLAGTIVKRASLHNEDII KKLDLHENDFVYVEKGGEIIPKIVGVNTDKRTEESREIEYIKHCPECGTELVKIEDQAIH FCPNELHCPPQVVGRMIHYVSRKALNIDNLGSETIEQLYREKLIENPADFYVLTKEQLLP LERMAEKSAQNIISGIEKSKEISFEKVLYGIGIKHVGETVAKKLVKNFPTIEELKAATVE ELCQVEDIGAKIAVSIVDFFQNSENILMIERLKSYGVQLEKGESTNEVLSNVLEGKAFLF TGKLSLFTREAAEEMVEKHGGKNISAVSKNLNYLVVGEKAGSKLKKAQDIGTIEILDEQQ FLDLIDKQ NT seq 2007 nt NT seq  +upstreamnt  +downstreamnt atgtctgaaaacattcaacaaaaaatagaacagctccgcaaagagctgcaccagcataac gaaagctactaccttctggatactcctaccgttacagattacgaatttgatatgttattg gaggaacttcaggatctggaagccaagcaccctgagttttatgatgaaaactctcctacc atgcgtgtaggtggtggtattacaaaggtattcccaacgattcagcataaattcagaatg tattctttggataattcttatgactttgatgatcttgaagactgggagaaaagaattatc aaaactatagatggacctgtagaatttgtggctgaattgaagtatgacggagcctcgatc tctattctttatgaaaacggaaaacttactcaggcggtaacccgtggtgatggttttcag ggagacgaaattacgccgaatgtccgtaccatttctgatattcccttaacgttaaaaggt gatttcccttcgcaattctttatgcgtggtgaaatttatttaacgagaaagaactttgac aaacttaataaacttcgcgaagaagagggactggatccattcatgaaccctagaaatacg gcaagtggaagtttgaaaatgcaagacagtgcagaggtaagaaaacgttcactttcttcc gtattataccaattcatttctgaagatattcctgctgaaacacactgggaattgctacaa aaggcacaaggctggggattcaagacctctcaacaggcaaagctttgtaaaacattggat gaggtaaaagagtttatcacattctgggatacggaacgtcacaacctgccattcgaaatt gatggaattgtactaaaagtaaattctttacagcagcaaagacagcttggatacacggct aaatctccacgttgggctatggcttataagtttaaagccgaaaaggtagaaactgagctt caaagtgtttcttaccaggtaggaagaaccggagcgattactcctgttgccaacttaaag cctgttttgttggctggaacgattgtaaaaagagcatctctgcataatgaagacatcatc aaaaagcttgatcttcatgagaatgattttgtctatgtagaaaaaggaggtgaaattatt ccaaagattgttggagtaaatacagacaaaagaactgaagagagcagagaaatagaatat atcaaacattgtccggaatgtggaactgagctggtaaaaattgaagaccaggcgatccat ttctgtccgaatgaacttcactgcccaccacaggtagtaggaagaatgattcattatgtt tcaagaaaagctttgaacattgataatcttggaagtgaaacgatcgaacagctttacagg gaaaaattgattgaaaatcctgctgatttttatgtgttaaccaaagaacagcttcttcca ctggaaagaatggcggagaaatctgctcagaatatcatctcagggattgaaaaatcaaaa gagatttcatttgaaaaagtattgtatggaatcgggatcaagcatgtaggtgaaacggtt gctaaaaaactggttaaaaacttccctactatagaagaattaaaagctgctactgtcgaa gagctttgtcaggtagaagatattggtgctaagatcgcggtaagtattgtagatttcttc cagaattctgaaaacatactgatgattgagcgtttaaaatcttacggggtacagcttgaa aaaggagaaagtacgaatgaagttttatccaacgttctggaaggaaaagcatttcttttc actgggaaattatctctattcaccagagaagctgctgaggaaatggtagaaaaacatgga ggaaagaatatttctgcagtttcaaaaaacctcaactatcttgttgttggggaaaaagct ggaagtaaactgaaaaaagctcaggatatcggaacgattgaaattctggatgagcaacag tttttggatttaattgataaacaataa

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