KEGG   Chryseobacterium nepalense: M0D58_13430
Entry
M0D58_13430       CDS       T08142                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cnp  Chryseobacterium nepalense
Pathway
cnp03410  Base excision repair
cnp03430  Mismatch repair
cnp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cnp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    M0D58_13430 (recJ)
   03430 Mismatch repair
    M0D58_13430 (recJ)
   03440 Homologous recombination
    M0D58_13430 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cnp03400]
    M0D58_13430 (recJ)
DNA repair and recombination proteins [BR:cnp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     M0D58_13430 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     M0D58_13430 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      M0D58_13430 (recJ)
SSDB
Motif
Pfam: RecJ_OB DHH DHHA1 DSPc Paf1
Other DBs
NCBI-ProteinID: UPQ75045
Position
complement(2993892..2995604)
AA seq 570 aa
MSQKWIYKPEPDEEIVDGLSSSLGFGTFESKLLVLRGIDNYQKAREFFKPNLTDIHNPFL
MADMQKAVERIATAIENGEKILVYGDYDVDGTTAVALMYLYLSKIVQKKYLDFYIPDRNS
EGYGISTEGIDFAKENGFSLIIALDCGIKALDMINYAQNLGIDFIICDHHLPGDEIPSAV
AVLDPKRSDCRYPFKELSGCGVGFKLCQGLNTIYKLPEAELFELTDLLAISIAADIVSMT
GENRVLAKMGLKILRKTRNLGLRLLIPDDKLSHFEISNIVFEIAPKINAAGRISHGKAAV
ELMVSDNLKHAHQIVSDIMDLNDERRELDMNSTLSALNQIIESQQETKYTTIVYHPEWNK
GVIGIVASRLIETYYKPTLVFTDGNNGEMVASARSVADFDVHEALDMCSEYFLKFGGHHA
AAGLSMEKDKFDAFKEKFERVVSEKIKEHQKEPSITIDSEIQIDEINREFINFHRKLAPF
GPHNMKPILALTNQKVSGYIKTMGKDNNHLKFYIRQESTGRNIECVGFKLGQFADDFRTK
SFDLVFTLEENHWKGNVTHYLNIKDVKFRD
NT seq 1713 nt   +upstreamnt  +downstreamnt
atgagtcaaaaatggatttacaagcccgaacccgatgaagaaattgtggatggattaagt
tcgtctcttggttttggaacttttgaatctaagctcctcgttcttagaggaattgacaat
tatcaaaaggccagagaattttttaaaccgaaccttaccgacattcacaatccgttttta
atggcagatatgcagaaagccgtagaacgcattgccaccgccattgagaatggagaaaaa
atactggtatacggagattacgacgtagacggaactaccgccgttgccctgatgtatctg
tacctcagcaaaattgttcagaaaaaataccttgatttttatattcccgacagaaattct
gaagggtacggaatttctacagaaggtattgattttgccaaagaaaacggcttttcatta
atcattgccctggattgcggaatcaaagcattggatatgatcaattatgcccagaattta
ggcattgattttatcatttgtgatcaccatttacccggcgacgaaattcccagtgcagtt
gccgttctcgatcctaaaagaagcgattgccgctatccttttaaagaactttccggatgc
ggagttggttttaaactttgccaaggtttaaatacgatctacaaacttcctgaagcagag
ctttttgaactcacagatcttcttgccatttctattgctgccgatattgtttctatgacc
ggagaaaaccgggttttggctaaaatgggtcttaaaatcctacgcaaaacgagaaattta
ggattacgattattaattcctgacgacaaactttctcattttgagatttccaatattgta
ttcgaaattgctcccaaaatcaatgctgcgggaagaatttctcacggtaaagctgctgta
gaactcatggtttctgacaacctgaagcacgctcaccagatcgtaagcgacatcatggat
ctcaatgatgaaagacgagaactagatatgaattccaccctttctgctctgaatcaaatt
attgaatcccagcaggaaacaaaatacaccactattgtttaccatcctgaatggaataag
ggcgtgattggaattgtagcatcaagattaattgaaacttattataaaccaactttggtt
tttactgacggaaataatggtgaaatggttgcttccgcgaggtctgtagcagattttgac
gttcatgaagctttggatatgtgctctgagtatttcctgaaattcggaggacatcacgct
gcagcaggactttcaatggaaaaagataaatttgatgccttcaaggaaaaattcgagaga
gtggtttcggagaaaattaaagaacatcagaaggaaccttccattactattgattctgaa
attcagatagatgagattaacagggagtttattaattttcacagaaagctggctcctttc
gggcctcataatatgaaacccatccttgctttaaccaatcagaaggtttcaggatatatt
aaaacgatgggtaaagataataatcatctcaagttttatatcagacaggaatcaacggga
agaaatattgaatgtgtaggtttcaaattgggacagtttgccgatgatttcagaacaaaa
agctttgatcttgtttttactcttgaagaaaatcactggaaaggtaatgtaacacattat
cttaatattaaagatgtgaaattcagggattaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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