KEGG   Comamonas odontotermitis: LAD35_16645
Entry
LAD35_16645       CDS       T07833                                 
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
codo  Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:codo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:codo03009]
    LAD35_16645
Enzymes [BR:codo01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     LAD35_16645
Ribosome biogenesis [BR:codo03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LAD35_16645
SSDB
Motif
Pfam: Methyltr_RsmB-F RsmF-B_ferredox Methyltr_RsmF_N Ubie_methyltran MTS Methyltransf_31 Methyltransf_25 TRM5-TYW2_MTfase GCD14
Other DBs
NCBI-ProteinID: UBB16423
Position
complement(3606291..3607562)
AA seq 423 aa
MHPKALLDACAELVAQVLTFEHPADAVVSRYFRDHRNLGPRERATLAETAYTVLRKKTLF
ETLARSGSGARERRLAILGFAGPRSFVKSALNPAEVKWLDECDAITPDSLMPQHRHNLPE
WLVEPLQAQVGDQFEQLAASMLEMAPLDLRANALSTKRADLQKELKAVGIAAEPTPYSPW
GLRVADKPALSRLEAFQKGRVEVQDEGSQLLALLLDAKRGEMVTDFCAGAGGKTLAIGAS
MRSTGRLYAFDVSAHRLEALKPRLARSGLSNVHPAAIAHERDERIKRLAGKMDRVLVDAP
CSGLGTLRRNPDLKWRQSQKAIDELTVKQAAILGSAARMVKSGGRLVYATCSILPAENEA
IAEAFAAAHPDFVPLDAGELLIGLKVENAASLCSGGDTGSQYLRLWPHLHQTDGFFAAVW
QRK
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgcatcccaaagccttactagatgcctgcgccgagctggtggcgcaggtcctgactttt
gaacacccggcagatgccgtggtgtcgcgatatttccgagaccaccgcaacctgggcccg
cgcgagcgggccaccctggccgagacggcctatacggtgttgcgcaagaaaaccctgttt
gagacgctggcccgctcgggcagcggcgcgcgtgagaggcgcctggcaatcctcgggttt
gccggcccgcgcagctttgtcaaaagcgcactcaatccggccgaggtgaaatggctcgat
gaatgtgacgccattacgcctgacagcctgatgccgcagcaccgtcacaacctgcccgaa
tggctggtggagccactgcaggcacaggtgggcgaccagttcgagcaactggccgctagc
atgctggagatggcgccgctcgacctgcgcgccaatgcgctcagcaccaagcgcgccgac
ctgcaaaaggagctgaaggccgtcggcattgccgcagagcccacgccatattcgccctgg
ggcctgcgcgtggctgacaagccagcgctctcgcgcctggaggcctttcaaaagggtcgg
gtggaggtgcaggacgaaggctcgcaactactggcattgctgctggatgccaagcgtggc
gagatggtgaccgacttctgcgcgggcgctggcggcaagacgctggccattggcgcctcc
atgcgcagcactgggcgcctgtatgcgtttgacgtgtcggcccaccggctggaggcgctc
aagccgcgcctggcccgctcgggactgtcgaacgtgcaccctgccgccattgcgcacgag
cgtgacgaacgcatcaagcgcctcgcaggcaaaatggaccgcgttctggtggatgcacca
tgctcaggccttggcaccctgcgccgcaacccggacctcaagtggcgccaaagccagaag
gccatcgacgaattgaccgtcaagcaggcggccatcctgggcagtgctgcacgcatggtc
aaaagcggcgggcgtctggtgtatgccacctgtagcatcctgcctgctgaaaacgaggcc
attgccgaggcgtttgctgctgcccaccccgattttgtgccgctggatgcgggtgaactg
ctcatcggcctgaaggtggagaatgccgccagcctgtgcagcggcggtgacaccggcagc
cagtacctgcgtctgtggccgcatctgcaccagacggatggcttctttgccgcagtgtgg
caaagaaaatag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (10)   

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