KEGG   Cucurbita pepo subsp. pepo (vegetable marrow): 111792470
Entry
111792470         CDS       T05351                                 
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
  KO
K13789  geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
cpep  Cucurbita pepo subsp. pepo (vegetable marrow)
Pathway
cpep00900  Terpenoid backbone biosynthesis
cpep01100  Metabolic pathways
cpep01110  Biosynthesis of secondary metabolites
Module
cpep_M00366  C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:cpep00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    111792470
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:cpep01006]
    111792470
Enzymes [BR:cpep01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     111792470
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     111792470
    2.5.1.29  geranylgeranyl diphosphate synthase
     111792470
Prenyltransferases [BR:cpep01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   111792470
SSDB
Motif
Pfam: polyprenyl_synt RTC4
Other DBs
NCBI-GeneID: 111792470
NCBI-ProteinID: XP_023529740
Position
LG04:complement(6387111..6390511)
AA seq 368 aa
MCLSLSDIHRPFRLHFSTAKFTENKRGRASTMAFSIMAASSLRMNFGTKASIRCSSSSSS
SSAVSSQAKSIQFDLKTYWKKLILEINQKLDEAVPIQYPDQIYEAMRYSVLANGAKRAPP
VMCVAACELFGVDRLAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDM
AILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIAKAVGSRGMAAGQFLDLEGGPNS
IEFVQEKKFGEMSQCSAVCGGLLAGAEDHEVQRLRRYGRAVGVLYQVVDDIRKEQAKKLD
QTDESKKRKGKSYVGVYGIEKAKEVAEELRTKAKKELEGFEKYGDRVMPLYSFVDYAADR
SFSLESST
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgtgcttatccctctcagacatccaccgtcctttcagactccatttttcgaccgcaaag
ttcacagagaacaagagagggagagcatcgacgatggcattttcgatcatggcggcatcc
tctctcagaatgaattttggaacaaaggcttcaattcgatgctcttcatcatcttcttct
tcttcagcggtttcttctcaagccaaatcgattcagtttgatttgaaaacgtactggaaa
aagctgattctcgagatcaaccagaagctggatgaagctgttcccattcagtaccccgac
cagatctacgaagctatgcgttactcggttttggctaacggagccaagcgagctcctccg
gttatgtgcgtcgccgcctgtgagctcttcggcgtcgatcgcctcgctgcattccctacc
gcctgtgctctcgaaatggttcatgcagcttcattgatccatgatgaccttccttgcatg
gatgacgatccctcacgtcgcggccaaccttcaaaccatacagtttatggtgttgacatg
gcaattctcgctggtgatgcactttttccccttggctttcaacacattgtctcacacaca
ccattcgacctcgttcccgagtcccgcttgctccgtgtggttgccgagattgccaaagcc
gttggttccagaggcatggcagcaggacagtttcttgaccttgagggaggccccaactcc
atcgaattcgtccaagaaaagaaatttggtgaaatgagccaatgctccgcagtgtgcgga
ggacttctagctggagcagaagaccatgaggtacagagattgagaaggtacggaagagcg
gtcggcgtgttgtatcaggtagtagacgatattcggaaagaacaagcaaagaaactcgat
caaaccgacgagagtaagaagagaaaagggaagagctatgttggagtatatgggattgag
aaggccaaggaggtggcagaggagctgaggaccaaagcaaagaaggaattggaaggattt
gagaagtatggagaccgagtgatgcctttgtacagctttgtggattatgctgctgatagg
agtttcagtttagaaagttcaacttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

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