KEGG   Cherax quadricarinatus (Australian red claw crayfish): 128701567
Entry
128701567         CDS       T09502                                 
Name
(RefSeq) huntingtin isoform X1
  KO
K04533  huntingtin
Organism
cqd  Cherax quadricarinatus (Australian red claw crayfish)
Brite
KEGG Orthology (KO) [BR:cqd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cqd03019]
    128701567
   04131 Membrane trafficking [BR:cqd04131]
    128701567
   03029 Mitochondrial biogenesis [BR:cqd03029]
    128701567
Messenger RNA biogenesis [BR:cqd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128701567
Membrane trafficking [BR:cqd04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab associated proteins
    128701567
Mitochondrial biogenesis [BR:cqd03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    128701567
SSDB
Motif
Pfam: Htt_N-HEAT Htt_C-HEAT Htt_bridge Htt_N-HEAT_1 HEAT GNC1_N HEAT_2 LTP_2
Other DBs
NCBI-GeneID: 128701567
NCBI-ProteinID: XP_053651311
Position
78:complement(4841114..4935899)
AA seq 2968 aa
MAALEKLIRAFEAVKLSQGGNGTNGGAPSMTAAGAQAGEQRPAEHPRTMASLASSLSQQS
QGLLSKKDQVLSSKEKASTCSIIADALVGAKPTEIQKLLSVGIETLLLLTADTDPDVRMN
ANESLNRVIRSLSETQLGKIQVELYKEIKKNGSVRSLRAALSRFAALCHHIRPQKGRAYV
QNLLPYVTRMARRPEEPLLETLAAALEKIMPTLGHFTNDNEIKNLLKAFLPNLSHTSSAV
RRSAVSSLTVLCRHSRKPPMFLGWLLSTILQILVPVQNDIPTSQALGCLLCLRSLVPHIG
ELCAPVIPSDTHHAHHTTHLHPAEYTVSYDQMLQVYELCLHFSKSSDHNIVTASLETLQT
LLQNPPVALLLTLTSPEGITRSRIMADPRASLLSSRVSSQISVAPSLFEEDNLLLDLEGG
SGRVSMDMDTPDEKLDFEESTKEEDDKGGGGGGGGGGGGGGIGGGGGGGGGGSGGSTEVQ
PADTAVDETDSRVSALYSSIEIGKLTDTSVLFGRGEINLNGEKRCIERDKRKHIYHISSH
SHNKSLEDKSVSIDKPSGSVGSFLDEDLPVRYLVRYLTSSFLLSGHAGLLVPDRAVRVSV
KVLALNCVGLAVMVMPSLMAEPLYTDAIGELELQQHIDDVLRFHSHSDPQLGASVGTVIG
QFIRASLVHGCGQYNDFGRPGLPLSSLLEVLCKLLVHESSVTARGALGGLGLCLGELLHS
LHAAVILSVLPHLVNTASNLYWLVKVELCDLLSGLPLSYTDHVESSSSYSTTGSSIPLRP
ADRFSHRVLTAVLIPLLADQDPRVRSAAASACVKLVPEIMSSGDLIHKVASSLVHSGCLK
GDKEDLGNNPQSLQHWSCRGLPSLPVAPLHRLFTVRNITPPECHGSAQGPAASQVSHSLS
RLIYAFTTHLMSTNSKFLMLGCVETLSQLSEKYPPALYPSAWGCHITPVQSSENKMHTGL
ITHVLSLAGESPFAGDLNVQQNILTIASNILAGIAIEVLRQGREDVVGAKAPWAFLGASQ
VTAVAECVVQHILRILCVYTHVLEDILPGSRPTLAPLTPQSTLSPIKRRSRGETTGDKNR
THSPSNGEKPDGEEKERKPLKPGPIGAFSHLPEYIKMYDVLKNAHTNYKMSLEDSTTEKV
CGLLRVALTSLGRLLEVASMVEFGKLADEMLQYLKVVTSLLPTLTVQCGQQLLKCLFGSN
VMALFDQLYRKVSEPVPHVSTDTVGSTNKRAVEEPDITGLHHLCFNIPLVELEKDLNEMS
VARKDSDQISFSLSQRKGSTSVFKTLGRGNDKLSLSSYIRLFEPLVIKALKLYTVSSDVI
MQRSVLQLLIHLVQIRVNYCLLDSDQIFIGYVIKQFEYIEEGQIKQAEELIPSMFRFLVL
LSYERHHSKSIIGVPKIIQLCDGLMASGQPPLSHCVLALQPLVEDLFLVRSTTSVTDQRE
LETQREVLCSMLLRLAHYHQVLRLISLVLSATMEAHRERWRKLSRQVIDTLLPLLSKLQV
NLDSVDSLAAVEEVMHGVCASVYRPVDCVLKALFTSPCELETTVGVERWVGSVLLLLRIL
ITHSTPELVLARLEELGLSMDYIHTETPADVVPTEASLAPEAVQRQVTDSSIRFRDPLNV
TQPETLPQVAMARFLLEVVRVSVSEIRSVRLTLLNSGLPPEGGGGHHSPDMLVHLSHHLL
LTLLHLTLSGQWREVIISLKDICSREVELAEEISEALLFVSGWYPPLTLLWCKLLTCLDL
TSQNLWTRVLRTCQRKSVTSVSSSVVSEASGPSSCLSLEFLRRCGLLVFSEFVVRHMQEG
EWLTWLVVQHISDVVILHVEPPIHTLIQSIHGSPAASALLIQAIHARCEYVQKAEYGGHI
ISLVSGVHISQSGALITFIVERLLALPYLVVTRAACALATQRLHLLLAMPPGQVLIQLPL
EDLTKISSYMKENNLEKRYGQLYGLLQRLLNQVHGVHVPQSSEASLPTQYHHSPTTTTTR
LDLNWYLQLVRNRCMQGEGGGLECGQLLSQLEYSEIINIMSGKTFNAAMLTHTLRLGLTT
TLQANRDWGDCNSSVETGDSEECSSGSGTGEAPLYTASKVILLQHLAQVAGSLPRPHHTF
TPGGGNKYSERVCKLLSGDDGIGSVVDTLAPAVVEYLTSMTRLPWGAQVLPDNSEHILRF
ALLAMEYLHWQVWLGSVSVEVASLCLNCVDAVLRCGTLSGLLGLPDRISYVCSMVAALHA
AASYLVKPRALPSLPPSLTQCLNGVESSLLVACRRLMQLVSWLEAGNLRHLPACIAYPIR
GIVMGLGRMPVVNSIVRIPPDMWRLGWAPQFFGEHGTNLPPIQVEFLQETDVLKQFIFRM
ELFGWIGRQQFEETWMALLSVLNSTPSENTPAEELPFINLSLSLAVRGITALLVQTLLLP
TPGNPHSGNLLSIPRDKPPHYLTSKSGRKLQEIMSCLHEKLREVQHLIKGGPRQTPPYQL
GQVSVEYLVTALNSHAEPPESPDTILHTGCYEFEIRERQLASCGLDVQSCLHFLHYLYSS
WLRPQSGLCASVVAEVVKSVSCLCDLFCSSAHHRWVLEALLPLHTLHPIEDHITQQHIIL
ATCKALATLRLAKQEVSSSLSEGVIHIVESGLKSGQVSVRTCAVQGLLYLLQGPSEESPP
LIVLAANYILKYNDGKSRECESHEVAVWEVWVYLVEHYETLPDPTLPSTALHMALSTAAT
SSTTPRLLHQVLKGVERLVLVQQLSSNTVEVIFKLVMDLVLNGSPSTSLAALPLFITALY
ANVRNTASLTHGVAQDDMASDPETLLLVMEKLSIFFDRIRVGYPHEAGVIAGLLGPCLLD
VLPASQILNKVITEYISSHQPHPHLLASTLFQVFEGAISESGEGLVQEWVLLSLSNFTQR
SPISLAVWCLTCFFIAASSNRWLRAAFPSVQARLGKLDVRDIQIFCLAASHFRQSLATEN
QRAKFEAVFQAVATPGSPFQELLDCIQD
NT seq 8907 nt   +upstreamnt  +downstreamnt
atggcagcccttgagaagttgattcgtgcctttgaggcagtaaaactgtcccagggaggc
aatggtacaaatggaggtgctccctcaatgacagcagctggggcccaggctggcgagcaa
cgccctgcagagcaccccagaactatggcctcgctagcatcgtcactgtcacagcagagt
cagggattgctcagtaaaaaagatcaagtactgagtagcaaagagaaagcttccacatgt
tccatcatagctgatgcactagttggggctaaacccacagagatacagaagttgctctca
gttggcatagagactttgctgctgctgacggctgatacggatccagatgtcaggatgaat
gccaatgagtcactgaatagagttatcagaagtctgtcagaaactcagttgggcaaaatt
caagttgaactgtacaaggaaatcaagaagaatgggtcggtgaggagcctgcgggcggct
ctgtctagatttgctgcactgtgccatcacatcaggcctcagaaaggtcgagcctacgtt
caaaaccttttaccatacgtgacacgaatggctcgccggccagaagaacccctgttagaa
acacttgctgctgctcttgaaaaaattatgccaactcttggtcatttcactaatgacaat
gaaattaagaatcttcttaaggcatttcttcccaatcttagccacacctcctcggctgtc
cgccgctcagccgtatcctctctcacagttctctgccgtcattctcggaagccgccaatg
ttcctgggctggctgctgagcaccattctgcagatcctggtaccagtccaaaatgatata
ccaacaagccaagctcttggctgccttctgtgcctacgctcattggtgcctcatataggg
gaactatgtgctcctgttataccctcagatacacaccatgcacaccataccactcatcta
cacccggcagagtatactgtctcatatgatcagatgcttcaggtttatgaattatgtctt
cattttagcaaatcttcggatcacaacatagtcactgcaagtttagaaacacttcagaca
ctgcttcagaacccaccagtagctctcctcctgactctcacttctcctgaggggatcaca
cgctcgaggatcatggctgatcctcgagctagtctgctttcatcaagagtgtccagtcag
atcagtgtggctccatcactgtttgaagaggataacttattattagatctggaaggtggc
agtgggagagttagtatggacatggacacccctgatgaaaaactcgattttgaggagagt
acaaaagaagaagatgacaaaggaggaggaggaggaggaggaggagggggagggggaggt
ggaataggaggaggaggaggaggaggaggaggaggaagtggaggaagcacagaagtacag
ccagctgacactgctgtagatgaaactgatagtagagttagtgctttatactccagcatt
gaaattggaaaacttacagatacctctgtgctttttggtagaggagagataaatttaaat
ggtgagaaacgttgcattgaacgtgacaagaggaaacacatttaccacatatcatctcat
tctcataataaatccctagaagacaaatcagtctccattgataagccaagtggttcagtt
ggctctttcttggatgaagatcttcctgtacggtatctcgtacgatacctgacttcctca
ttccttttatctgggcatgctgggttattagttcctgaccgggcagtccgagtgagcgtc
aaagtgttggctcttaactgtgtagggttggctgtgatggtgatgccttctctgatggct
gaacctctctatacagatgcaattggagaattggagctacagcaacacattgatgatgtt
ttgaggtttcatagtcattccgaccctcagcttggagcaagtgtgggcactgtcattgga
cagttcattcgtgccagtcttgtccatggatgtggacagtataatgactttggtcgaccg
gggttacctttatcttcacttcttgaagtcctttgcaagttgcttgtacacgagtcaagt
gtaacagcacgtggagctctgggtggtctggggctctgcctgggtgagctacttcactcg
ttgcatgccgcagtcatactgtctgttttaccgcatttggtaaatacagcctcaaatcta
tattggttggtcaaagttgaactgtgtgatctcctctcaggattgcctctgagttataca
gaccatgtagagagtagcagcagctacagcactacaggaagttccattccacttagacct
gccgacaggttttctcatcgtgtattaacagcagttcttattcctctcctggccgatcag
gaccccagagttcgttcagcagctgcttcagcttgtgtcaaattagtacctgaaataatg
agcagtggagacttgatacacaaagtggcttccagtcttgtgcatagtggctgccttaaa
ggggataaagaggatttgggaaataacccacaatcacttcaacactggtcttgtaggggt
cttccctcgttgccagttgcaccacttcatcgtctctttactgtgagaaacattactcca
cctgaatgccacggttcagcacaaggcccagcagcatcacaggtgtcacattctctctca
cgccttatctatgcattcactactcacttaatgagtaccaatagcaagtttttaatgctt
ggatgtgttgagaccttgtcgcaactcagtgagaagtatcctcctgccctgtacccatca
gcatggggttgccacattactccagtgcagtcaagtgaaaataaaatgcatactggactg
atcacccacgttctctccttggctggagaatctccatttgcaggagatctaaacgtacaa
cagaacattctcacaatagcttcaaacattcttgcaggtattgcaattgaagttttaaga
caaggcagagaagacgttgtaggagctaaggcaccatgggcattcttaggggcatcgcag
gtgactgctgtggcagagtgtgttgttcagcacatcctgcgtatactatgtgtatacacc
catgtgttggaagatatcttaccaggttcaaggcctacacttgctcctcttactccacag
tcaacgctttctccaattaaaagaagatcaagaggagagactactggtgacaagaaccgc
acacattcacctagcaatggagaaaaacctgatggtgaagagaaggagaggaagccgctg
aaacctggacctattggagctttctcacacttgccagagtatattaaaatgtatgatgtg
ctcaaaaatgctcacacaaattataagatgtccttggaagatagtacaacagaaaaggtc
tgtggattgctcagagtggccctcactagcctggggagactcttggaagtggcatcaatg
gtagaatttgggaaacttgccgatgagatgcttcagtacctgaaagtcgtcacgtctctc
cttccaacactcacagtgcagtgtggacagcagcttctgaagtgcttgtttggttcaaat
gtgatggcactctttgaccagctataccgcaaggtttccgagcctgtgccccatgtgtca
acagatacagttggaagcacaaacaaacgggcagtggaggagcctgatattactggtctc
catcatctttgtttcaatattccactggttgaactggagaaagacctgaatgaaatgtct
gtggccaggaaagacagtgaccaaatcagttttagtctgagtcaacggaaaggaagcact
agtgtcttcaagaccctgggacgtggtaatgataaattatcattgagttcttacataaga
ctttttgaaccattggtcatcaaggccttgaagctgtatacagtatcaagtgatgtcatc
atgcagagatcagtcctgcagctgctgatccacctcgtacaaattcgtgtcaactattgc
cttttggactccgatcagatatttattggttatgtgatcaagcaatttgaatatattgaa
gaaggacaaatcaagcaggcagaggagttgattccctccatgtttcggttcctagtactg
ctgtcttatgagcggcatcacagcaagagtatcattggggttcccaagataattcagctt
tgcgatggtcttatggctagtggtcagcctcccctatctcactgtgtattggcactacaa
ccactagtggaggatctcttcttggtgcggagcacaacgagtgtgactgatcaacgtgag
cttgaaactcaacgagaagtcctctgctcaatgctcctaagacttgcacattatcaccag
gttcttcgccttatctccctggtgttaagtgctacaatggaagctcacagggagcgctgg
aggaagctctcacgacaagtgattgacacgctgcttccactcttgtccaagttgcaagtt
aatcttgattccgtggattcccttgcagccgttgaagaagtaatgcatggagtgtgtgcc
agtgtgtatcgtcctgttgactgtgtactgaaggctctctttacttctccttgtgaacta
gagactacagtgggtgtagagagatgggtgggcagtgtgttgctgctgcttcgtattctt
ataacccactctaccccggagttggtgctggcacgcctagaagagctgggcctcagtatg
gactatatacatactgaaacacctgcagacgttgttcctacagaggcttccttagcgcca
gaggctgtacaacgacaggttacagattcgtcaattcgttttagagatcctctgaatgtt
acccaaccagaaactcttccgcaagtagccatggccagatttttgctggaggttgttcgt
gtgagtgttagtgagatcagaagtgtgcggctcaccctgctgaacagtggactacctccg
gaaggtggaggtggacatcattctcctgatatgttggttcatctgtcacaccacttgctg
ctcactctcttgcatctgaccctctcaggtcagtggagagaagtgataatttcactgaag
gacatttgtagcagggaagttgaattagctgaagaaattagtgaagctctgctctttgta
tcaggctggtatcctcccctcacactgctctggtgcaagctactcacctgtcttgatctc
acttcccagaacctatggacccgtgtgctcagaacctgccagagaaaatcagtcactagt
gtaagtagttctgttgtgagtgaagcaagtggaccttctagctgcttgtctttagaattc
ttaagaagatgtgggcttcttgtgttctcagaatttgtggttcgtcacatgcaggaagga
gagtggttaacttggctcgttgtgcagcacataagtgatgtggttattctccatgtggag
ccaccgattcatacgctcattcagtccatccatggatctccagcagcctcagcacttctc
attcaggccatccacgctcgctgtgaatatgtccaaaaggcagagtatggtgggcacata
atttcactggtgtcaggagttcatatatcacagtcgggagcacttataaccttcatagtg
gagcggctgctagcactgccgtacttagtagtgacgcgggctgcctgtgcattggccact
cagcgattgcacctcttgctagccatgcctccgggacaagttctgattcagcttcctctg
gaagatcttaccaaaatttctagttatatgaaggaaaataaccttgagaaacgatatggg
cagttgtatggcctactacaacggctcttgaaccaggtccatggtgtccatgttcctcag
agcagtgaggcctcattacccactcagtaccaccatagtccaacaactaccactactcgt
ttagatctcaactggtacctgcaacttgtaagaaacagatgtatgcagggagaaggaggt
gggctggagtgtggccagctgttgagtcagctggagtatagtgaaattatcaacattatg
tctgggaaaacattcaatgctgccatgctgacacacaccctgagattgggacttaccact
accctacaggccaacagagactggggtgattgtaacagttcagtggagacaggtgacagt
gaagagtgcagcagtggtagtggcactggggaagctcccttgtacactgccagcaaagta
atattgcttcaacatctagcccaggttgctggctccttaccacgcccacatcacaccttc
accccaggtggaggaaacaaatacagtgagcgagtgtgcaagctgctgtctggcgacgat
ggtattggtagtgtggtggatacactggctccagctgtagtggagtaccttacttcaatg
acacgtcttccctggggtgcccaggtcttgccggacaactcggagcatatactgcggttt
gctctcttggctatggagtatctgcactggcaagtttggctaggcagtgtgagtgttgag
gtagccagtctgtgcctaaactgtgtggatgctgtcttgcgttgtggtactttatccggc
ctgttgggtctacctgaccggatatcttatgtctgttctatggtggccgcccttcatgct
gctgcctcttatctcgtcaaacctagagcacttccaagtcttccacccagcttgacccag
tgtctaaatggagtagagagcagcctgctggtggcttgccgaagactcatgcagctggtg
tcatggctggaggctggcaacttgcggcatcttccagcttgtattgcttacccaatcagg
ggcattgtgatgggtttggggcgcatgccagtggtgaacagtattgtgagaatacctcct
gacatgtggagactaggttgggctccacagttcttcggagaacatggtacaaatttaccg
cctattcaggtagaatttctgcaagaaactgatgttctcaagcagtttatatttagaatg
gaactttttggttggataggacggcaacaatttgaagagacctggatggcactgttatca
gtgctaaattctactcctagtgagaataccccagcagaggaactacctttcattaatctg
agtttgtcgctggccgtacgaggaatcactgcacttttggttcagacccttctattaccc
acacctggcaaccctcacagcggcaacctattaagtatcccaagagacaaacctccacac
tacctgacttctaagtcagggcggaaacttcaagagattatgtcgtgtcttcacgaaaaa
ctacgagaggtacaacacctaatcaaaggaggaccgcgacagaccccaccatatcagctg
ggccaggtgtcagtcgagtatctagtaacagctctcaacagtcatgcagaaccaccagaa
tctcctgacactatcttacacactggctgttatgagtttgaaatacgagagagacagtta
gcgagctgtggtcttgacgtccagtcctgtcttcacttccttcactacctgtattcctca
tggctgcgaccccagagtggcttgtgtgcgtctgttgtggcagaagtagtaaagtctgtg
agttgtttatgtgacttattctgctcaagtgctcaccaccgctgggtcctggaagcactt
ctgcctctccataccctccaccctattgaagaccacatcacccagcagcacatcattctg
gctacctgtaaagctcttgcaactcttagattggccaaacaggaggtgagctcatcactg
agtgaaggtgtgatacacatagtggagagtggactcaagagtggacaggtgtctgtacgt
acctgcgccgtccaaggcctcctctaccttctccagggaccatcggaggagagcccgccc
ctcattgttctggctgctaactacattctcaaatacaatgatgggaagagtcgagaatgt
gagagtcatgaggtggccgtgtgggaggtgtgggtttatttggtagaacactatgaaaca
ctacctgatcccactctgccatctactgctctccacatggccctttcaacagcagccact
tcttccacaactccacgtctcctccaccaagtcttgaagggtgtagaaagactggtgtta
gttcagcaactctccagtaacactgtagaagtgatcttcaaattagtgatggacttggtt
ttaaatggttctccttccacctctttagctgccttgccattattcatcactgctctttat
gctaatgtaagaaacactgcatctcttacacatggtgtagcacaagatgacatggcatca
gacccagagactctcttacttgtcatggagaaactctccatattttttgaccggattcgg
gttgggtatccccatgaggcaggtgttattgctggtctgcttggaccatgccttttagat
gtccttcctgctagtcagatactgaataaagtgatcacagaatatatttctagccatcaa
ccacatcctcatctactcgcctcaacccttttccaggtatttgaaggggctatcagtgag
agtggggaaggtttagtacaagaatgggttctactttcgcttagcaacttcacacaacgt
agccctatttcccttgcagtttggtgcttaacttgcttcttcattgcagcctcgagtaat
agatggctccgagcagcttttccttccgttcaagcacgtctgggaaaactggatgttcgt
gacatccagatattttgtctggctgcttctcatttccgccagagtttggcaacggaaaac
cagagggcaaagtttgaggcagtgttccaggctgtggctactccaggatcaccatttcaa
gagttattagattgtattcaagattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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