KEGG   Chenopodium quinoa (quinoa): 110687316
Entry
110687316         CDS       T05764                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110687316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110687316
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110687316
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2
Other DBs
NCBI-GeneID: 110687316
NCBI-ProteinID: XP_021719640
Position
Unknown
AA seq 674 aa
MASSQVGILIPLNKSLEKEKSLPELPVSEGDNVIGRSNVPVTDKRLSRKHLILSASFDGS
ANLVVEGMNPVVVNSGGQRKVLNSGEKASVNCGDILELIPGSYCFKYVALSNKRNTDAVS
KGSKGSRERINLGDGRKRAREDLNFGASTGHLTLQHGIGRNVKENIDNVSVESKRQNHIV
SRNTEEALRDFHVSNDSLPSTFRLMKVQGLPEWANTSCVSIDNVIEGDVIVAVLSNYMVD
IDWLLSACPMLRKVPQVLIVHGEGDGTVEYMKRNKPSDWILHKPTLPISYGTHHSKAMLL
VYPQGLRVIVHSANLIHVDWNNKSQGLWMQDFPWKDQNATSKGCPFESDLIDYLQALKLP
EFTASLPALGRVKINASFFKKFNYENAAVRLIASVPGYHSGSSLKKWGHMKLRSILEQCT
FDDEFKKSPLIYQFSSLGSLDEKWMTELRTSMSSGLSADASPLGLGEPLIIWPTVEDVRW
SLEGYAAGNAIPSPLKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTFVRYNGQNLAWFLL
TSANLSKAAWGALQKNSSQLMVRSYELGVLFLPTVAKNDFGFSCSDDRSSLKDTRGPTGG
CGTRKIKLVTLTWPGRDNDDSDSEIVSLPVPYEVPPKLYSSQDIPWSWDRVYRQKDVYGQ
VWPRQVKLYSSQDA
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggcgtcttctcaggtaggaattttgattccgttgaataagagcttggagaaggagaaa
tcgttgccggaattgccggtttctgaaggtgataatgtgatcgggcgtagtaatgttccg
gtgactgataaaagacttagtcgcaagcacctcattttgtctgcttcttttgatggctct
gctaatttggttgtggaaggaatgaatcctgtggtggttaattctggcggtcagaggaag
gttttgaattctggagaaaaagcttctgttaattgtggtgatatcttagaattgatacca
gggagttattgttttaagtatgtagccttaagtaacaagagaaacactgatgctgttagc
aaagggagtaaaggttctagggaacggataaatctcggagatggtaggaagagagcacga
gaagacttgaactttggagcttctacgggacacttgacgcttcagcacgggatcggaaga
aacgtaaaagaaaatattgataatgtaagtgttgaatctaaaaggcagaatcatatagtg
tccaggaatactgaggaggcgctacgtgattttcatgtgtctaatgatagtctgccttca
acatttcgccttatgaaagtgcaagggctaccagaatgggcgaacacctcttgtgtttct
attgacaatgtgattgagggagatgtgattgttgctgtactttcaaattacatggtggac
atagactggctgttatcggcatgcccaatgcttagaaaagttcctcaggtgctgattgta
catggagaaggtgacggtaccgttgaatacatgaagaggaacaagcctagcgattggatt
ttgcataaaccaacattacctatctcatatgggacgcaccattcaaaggctatgctgctt
gtatatcctcagggtctgagggtcattgtgcattcggcaaacttgattcatgttgattgg
aacaataaaagtcaaggcttgtggatgcaagacttcccatggaaagaccagaatgcgaca
agcaaggggtgtccttttgaaagtgatcttattgattatttacaggctctaaagttgcca
gaatttactgccagtttgccagcccttggtagagtgaaaataaatgcttccttctttaag
aagttcaattatgaaaatgcagcggtcagattaattgcatcagttccaggatatcattcc
ggatccagtctaaagaagtggggtcatatgaaactacgctctatcctagagcaatgcact
tttgatgacgaatttaagaaatcacctttaatttatcagttttcctctcttggttcgctg
gatgagaagtggatgactgagctaagaacttcaatgtcatctggattgtcagctgatgca
tcccccctaggtttgggcgaaccactgatcatatggcctactgtggaagatgtcagatgg
tcacttgaggggtatgcagctggaaatgcaatcccgagtccacttaaaaatgtggaaaaa
gaatttttgaagaaatactgggcaaagtggaaggctacccacacgggtcgctgccgtgca
atgccccatataaagacatttgttcgttataatggtcaaaatctcgcttggtttttatta
acttcagcaaatctcagtaaagctgcctggggagcccttcaaaagaatagttctcaattg
atggtccgttcctatgagcttggcgtgctgtttttgcctactgttgctaaaaatgatttt
ggattttcttgctcagatgatagaagctctctaaaggatacaaggggaccaacaggtggc
tgtggaactcgaaagataaaactggttactctgacttggcccggaagagataatgatgat
tctgattctgaaatagtttctcttcctgtgccatatgaagttcctccaaagctgtactcc
tctcaagatataccatggtcttgggaccgtgtataccgacagaaggatgtatatggtcaa
gtttggcctaggcaggtcaagctttatagctctcaagatgcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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