KEGG   Chenopodium quinoa (quinoa): 110731390
Entry
110731390         CDS       T05764                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1-like isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110731390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110731390
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110731390
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA_2
Other DBs
NCBI-GeneID: 110731390
NCBI-ProteinID: XP_021766943
Position
Unknown
AA seq 674 aa
MVSSQVGILIPLNKSLEKEKSLPELPVSEGDNVIGRSNVPVTDKRLSRKHLILSASSDGC
ADLLVEGMNPVVVNSGGQRKVLNSGEKASVNYGDILELIPGSHYFKYVALSNQRNTDAVS
KGIKGARERTNLGDGRKRAREDLNFGASAGHLTLQHRIGRNVKENIDNVSVESNRQNHSV
SRNTEEALRDFHVSNDSLPSTFRLMKVQGLPEWANTSCVSIDNVIEGDVIVAVLSNYMVD
IDWLLSACPMLRKVPQVLIVHGEGDGTVEYMKRNKPSDWILHKPPLPISYGTHHSKAMLL
VYPQGLRVIVHSANLIHVDWNNKSQGLWMQDFPWKDQNATSKGSPFESDLIDYLQALKLP
EFTASLPALGRVKINASFFKKFNYENAAVRLIASVPGYHSGSSLKKWGHMKLRSILEQCT
FDDEFKKSPLIYQFSSLGSLDEKWMTELRTSMSSGLSADASTLGLGEPLIIWPTVEDVRW
SLEGYAAGNAIPSPLKNVEKEFLKKYWAKWKATHTGRCRAMPHIKTFVRYNGQNLAWFLL
TSSNLSKAAWGALQKNSSQLMIRSYELGVLFLPTVVKNDFGFSCTDDKSSLKNTRGPTGS
CGTRKIKLVTLTWPRRDNDDSDSEIVPLPVPYELPPKLYSSQDVPWSWDRVYRQKDVYGQ
VWPRQVKLYSSQDA
NT seq 2025 nt   +upstreamnt  +downstreamnt
atggtgtcttctcaggtaggaattttgattccgttgaataagagcttggagaaggagaaa
tcgttgccggaattgccggtttctgaaggtgataatgtgatcggccgtagtaatgttccg
gtgactgataaaagacttagtcgcaagcacctcattttgtctgcttcttctgatggctgt
gctgatttgcttgtggaaggaatgaatcctgtggtggttaattctggtggtcagaggaag
gttttgaattctggagaaaaagcttctgttaattatggtgatatcttagaattgatacca
gggagtcattattttaagtatgtagccttaagtaaccagagaaatactgatgctgttagc
aaagggattaaaggtgctagggaacggacaaatctcggagatggtaggaagagagcacga
gaagacttgaactttggagcttctgcgggtcacttgacgcttcaacacaggattggaaga
aacgtaaaagaaaatattgataatgtaagtgttgaatctaataggcagaatcattcagtg
tccaggaacactgaggaggcgctacgtgattttcatgtgtctaatgatagtctgccttca
acatttcgccttatgaaagtgcaagggttaccagaatgggcaaacacctcttgtgtttct
attgacaatgtgattgagggggatgtgattgttgctgtactttcaaattacatggtggac
atagactggctgttatcggcatgcccaatgcttagaaaagttcctcaggtgctgattgta
catggagaaggtgacggtacagttgaatacatgaagaggaacaagcctagcgattggatt
ttgcataaaccaccattacctatctcatatgggacacaccattcgaaggctatgcttctt
gtatatcctcagggtctgagggtcattgtgcattcggcaaacttgattcatgttgattgg
aacaataaaagtcaaggcttgtggatgcaagactttccttggaaagaccagaatgcgaca
agcaagggaagtccttttgaaagtgatcttattgattatttacaggctctaaagttgcca
gaatttactgccagtttgccagcccttggtagagtgaaaataaatgcttccttctttaag
aagttcaattatgaaaatgcagcggtcagattaattgcatcagttccaggatatcattcc
ggatccagtctaaagaagtggggtcatatgaaactacgctctatcctagagcaatgcact
tttgacgacgaatttaagaaatctcctttaatttatcagttttcctctcttggttcgctg
gatgagaagtggatgactgagctaagaacttcaatgtcatctggattgtcagctgatgca
tccaccctaggtttgggcgaaccattgatcatatggcctactgtggaagatgtcagatgg
tcacttgaggggtatgcagctggaaatgccatcccgagtccacttaaaaatgtggagaaa
gaatttctgaagaaatactgggcaaagtggaaggctacccacacgggtcgctgccgtgca
atgccccatataaagacatttgttcgttataatggtcaaaatctcgcttggtttttatta
acttcatcaaatctcagcaaagctgcctggggagcccttcaaaagaatagttctcaattg
atgatccgttcctatgagcttggcgtgctatttttgcctactgttgttaaaaatgatttt
ggattttcttgtacagatgataaaagctctctaaagaatacaaggggaccaacaggtagc
tgtggaactcgaaagataaaactggttactctgacttggccacgaagagataatgatgat
tctgattctgaaatagttcctcttcctgtgccatatgaacttcctccaaagctgtactcc
tctcaagatgtaccatggtcttgggatcgtgtataccgacagaaggatgtatatggtcaa
gtttggcctaggcaggtcaagctttatagctctcaagatgcctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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