KEGG   Chenopodium quinoa (quinoa): 110733905
Entry
110733905         CDS       T05764                                 
Name
(RefSeq) transcription factor bHLH140-like isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cqi  Chenopodium quinoa (quinoa)
Pathway
cqi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cqi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    110733905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cqi03400]
    110733905
Enzymes [BR:cqi01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     110733905
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     110733905
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     110733905
DNA repair and recombination proteins [BR:cqi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     110733905
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     110733905
SSDB
Motif
Pfam: DcpS_C AAA_33 zf-C2HE Macro HIT AAA_18 Zeta_toxin AAA_29 ABC_tran nSTAND3 AAA
Other DBs
NCBI-GeneID: 110733905
NCBI-ProteinID: XP_021769673
Position
Unknown
AA seq 751 aa
MEKEMEVDNFNPNPSKAENGKVLVVIMVGAPGSGKSTFCDLVMGASSRRWARICQDNINK
GKAGTKAQCISTAVVALKDKKSVFIDRCNLDREQRAEFVKLGSSEVDVHAVVLDLPAKLC
ISRFVKRTGHEGNLQGGRAAAVVNRMLQKKELPQLSEGFSRITICHSESEVEDTIITYRR
LSAEDALPSGCFGQKTPDAKVQVGIMKFLKKADPPSLGSGSSMTQSSFSSKSVKESQICS
EGSKPDAFEGASNEEHKHHLVLESVSDAAALTNSKEDSSSLDISVTLAFPSISTADFQFD
HDKASDIILETVEEYSSKLKNARLVLVDLTHKSKILSLVKSKAVQRNINPEKFSTFVGDV
TCLYSKGGLRCNVIANAANWRLKPGGGGVNAAIFSAAGPSLEVATKKRANSLAPGKAVVI
SVPADSPLFIREGVTHVIHVVGPNMNPQRPNCLKNDYDEGCKILREAYSSLFEGFASILK
RSELQDHRGQRNENASEQRIKREIVHDEERSKKNKGLEHEVGSGINVLGKEKEKEKQNKS
KSASKAWSSWAQALYNIAMNPEKHKSTVIDTATDVVVLNDAYPKAKRHILVLARLNGLDG
VGDVCQEHLQLLRTMQQVGIKWTERFLQEDESLIFRLGFHSVPSMRQLHLHVISQDFNSQ
HLKNKKHWNSFNTEFFRDVVDVIEDVEKFGKPSIQDEGLLSKELRCHRCKSAHPNIPRLK
SHISNCQAPFPATLLQNGRLVQGQTKVDADS
NT seq 2256 nt   +upstreamnt  +downstreamnt
atggagaaagaaatggaagttgataatttcaaccctaatccaagtaaagcagaaaatgga
aaggttttggtagtaataatggtgggtgcaccaggcagcggcaagtccaccttctgtgac
cttgtcatgggcgcctcttctcgccgctgggctcgaatctgccaggacaatattaataag
ggcaaagctggaaccaaagctcaatgtataagcactgcagttgttgctctgaaagacaaa
aaaagtgtattcattgacagatgcaacctggacagagaacagcgtgctgaatttgtgaag
cttggcagttctgaagtagatgtgcatgctgtggtgcttgatttgcctgctaagctctgt
atctcacggtttgttaaacgtacagggcatgaaggtaatttgcagggtggaagagctgct
gcagttgtgaatagaatgcttcaaaagaaggaattgccacagctgagtgaaggattttct
cggatcaccatctgccacagtgagagtgaggtagaagatactattataacctatagaaga
cttagtgcagaagatgctctcccttcaggctgctttggtcagaagaccccagatgctaag
gtccaggttggtataatgaagtttttgaaaaaagctgaccctcctagtttgggttctggt
tcaagtatgacccagagctctttctctagtaaatcagtgaaagaatcacaaatctgtagt
gaaggatccaaacctgatgcctttgaaggggccagtaatgaggagcacaaacatcatttg
gtactggagtctgtttctgatgctgcggctttgacgaactccaaggaggattcttcttcc
ttggacatatctgtcaccttggctttcccttcaatttcaaccgcggactttcagtttgat
cacgataaggcctccgatattattcttgaaacagtagaagaatattcgagtaagctgaag
aatgctagacttgttttggtggatttgactcataaatcaaagattttgtctttggtcaag
tctaaagctgtacaaagaaacatcaatcctgaaaaattctccacatttgtgggagatgtt
acttgtctgtattctaaaggaggcttacgctgcaatgtcattgccaatgctgctaattgg
cgactcaagcccggaggtgggggtgtgaacgctgccatatttagtgctgcaggcccaagt
ctagaggttgcaaccaaaaaaagagccaattctcttgctccaggaaaggctgtagtcatt
tctgtccccgctgattcacctttgtttattagggaaggagtgacacatgtcattcatgtt
gttggaccaaatatgaatccccaaagaccaaattgtctgaaaaatgactatgatgagggc
tgtaaaatccttcgtgaggcttactcatcactctttgaaggttttgcgtccattcttaag
aggtctgaactgcaggaccacagagggcagagaaatgagaatgcttctgagcaaaggata
aagagagagattgtacacgatgaagaaagaagcaagaaaaacaagggactggagcatgaa
gttggatctggtatcaatgttttggggaaggagaaggagaaggagaaacagaacaagtca
aagagtgcatcaaaagcttggtcatcttgggctcaggcattatacaatatagcaatgaat
cctgagaagcataagagcactgttatagacacggcgactgatgttgttgtactaaatgat
gcttacccaaaggcaaaacgacacattcttgtgcttgctcgtttgaatggtctggatggc
gttggagatgtgtgccaagaacaccttcagttattgagaacaatgcagcaagtgggcata
aaatggactgagagattcttgcaggaggatgaatcccttattttccgccttggatttcat
tcagttccatcaatgaggcaattgcatcttcatgtcatcagtcaggacttcaactcgcag
catttgaagaacaagaagcattggaactcttttaacactgaattcttccgagatgtagtt
gatgtgatcgaagacgttgagaaatttgggaaaccctcaatacaagatgagggccttcta
tcaaaagagttgcgttgccatcgctgtaagagtgctcaccctaatataccacggctaaaa
tcacacataagcaattgtcaagctccctttcctgccactctacttcaaaatggccgacta
gtacaaggacaaactaaagtagatgcagattcttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system