KEGG   Capsella rubella (pink shepherd's-purse): 17895462
Entry
17895462          CDS       T02984                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
crb  Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:crb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:crb03041]
    17895462
Spliceosome [BR:crb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    17895462
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    17895462
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 17895462
NCBI-ProteinID: XP_006300681
UniProt: R0HUS6
Position
Unknown
AA seq 901 aa
MGRHDSSSEEEERVRRRDRRRRERSPDVRRSRMETDDVGLRARVSDDEDHKSSRRDLEIG
ERRRGDKVRKETSSDEESARRSRKDRREADSGSDDDRGKRIEVDNDADVERRVSKGRNKD
GVRADTASDEESGKQLDTDDGTKTRRGLDDEDVDDVSEQRSRKRSPKVMEKQSRERSHRG
SRVVADKPSDEEDDRHRSRRGRGESERKRRDHRASDDDEEGEIRSERRGKERNDRGNEGL
LKRDRRDRDLTDGHENGSRRREIKRKDRSRRDDGVRDEKDRRHNDRYDDGQRDKVRKEDN
SKREVKVEVAKPKLAELNPSENNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTW
DALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALV
AVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAEEIIALELVT
VLLEDPTDDSVEVAVGFVTECGAMLQDVTPKGLHGIFERFRGILHEGEIDKRVQYLIESL
FATRKAKFQGHPAVRPELDLVEEKYSHDISLDQEINPETALDVFKPDPDFVENEKKYEAL
KKELLGDEESEDEDGSDASSEDNDDEEDESDEEDEEQMRIRDETETNLVNLRRTIYLTIM
SSVDFEEAGHKLLKIKLESGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQEN
FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIK
ILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLR
EYLKNMPRLIMQQQKQVAESESGSSSGSESSGSESESESDSSSSSSSDESDREKRKRRRR
S
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgggtaggcacgatagttcctccgaggaagaagagagagttagaagaagggataggaga
agacgagagaggagcccagatgttagacgatctaggatggagactgatgacgttggtctt
cgtgctagggtttctgatgatgaggaccacaagagctcccgccgagatcttgagattggt
gagagacgccgtggagataaggtcagaaaagagacttcttctgatgaggaatcagccagg
cggtccagaaaggatcgtagagaagcagactctggttctgatgatgatagaggtaaaaga
attgaggtagataatgatgctgatgttgagaggagggtgagtaaagggagaaataaggat
ggggttagagctgacactgcttctgatgaagaaagtgggaagcaacttgacactgatgat
ggaacaaagacccgtagaggtttggacgatgaagatgttgatgatgtttccgaacagaga
agcaggaagagaagccctaaagtcatggagaaacagagtagagagaggagtcacaggggt
agtagagtcgtagcagataaaccttccgatgaagaagatgataggcacaggagtagaagg
ggtaggggagaaagcgagaggaagcgtagggatcatcgagcatctgacgatgatgaggaa
ggtgagattaggagtgagagaagaggaaaagagaggaatgatagaggtaatgaaggtctc
ttaaagagggatcggagggacagagacttgactgatgggcatgagaacgggagtcggcgt
cgggaaattaaaaggaaggataggagtcggagggatgatggagttagagatgaaaaagat
aggagacacaatgatagatatgatgatggtcaaagagacaaggtgagaaaggaagataac
agtaaaagggaagtcaaggttgaggttgcaaagcccaagttggcagaactcaatccatct
gagaacaatgctatggccttgggaaaaacaggaggagtttatattcctccgttcaagcta
gcacgcatgatgaaggaggtggaagataagagtagtgtagagtatcaacggcttacatgg
gatgccctccgtaaaagtattaatgggctcgtgaataaggttaatgcaagcaacatcaag
aacataatccctgaactttttgctgaaaatctcatcagaggaaggggacttttctgccgt
tcatgtatgaagtctcaaatggcatctcctggattcactgatgtctttgcggctttagtc
gctgttattaacgccaaattccctgaagttgctgaacttctattgaaaagggtcgttttg
cagctaaagagagcgtataagcgtaatgacaagcctcaattgcttgctgctgtaaaattt
atagcgcatctagtaaaccagcaagtcgctgaggagattatagcacttgaattagtcact
gtacttcttgaagacccgactgatgacagtgtggaggtggctgttgggtttgtgaccgag
tgtggtgcaatgcttcaagacgttacaccaaaaggattgcatgggatctttgagcggttt
cgtgggatactgcacgagggagagatagataagagagttcagtacttgattgaaagtctc
tttgctactaggaaagcgaaatttcagggacatccggccgttcgtcctgagctagatctc
gttgaagaaaaatattcacacgatatctctcttgatcaggaaattaatcctgaaactgct
cttgatgttttcaaacctgatcctgacttcgttgagaacgaaaagaaatatgaggcactg
aagaaagagttactgggtgatgaggagtctgaggatgaagatggctctgatgctagttca
gaggataatgatgatgaggaagatgaatctgatgaagaagatgaagagcaaatgagaata
agagacgagacagagactaatctagttaatcttaggaggacaatctacctgaccataatg
tccagtgttgattttgaggaagcaggtcacaaattacttaaaattaagcttgaatctggt
caagagatggaactatgcataatgctcctggaatgttgctcccaggagagaacttatctg
cgttactacggattgttgggtcagcgtttctgtatgatcaacaaaattcatcaagaaaat
tttgagaaatgctttgttcagcagtattcgatgattcaccgtctggagacgaacaagttg
cgtaacgtggctaaattttttgcccatttattgggcacggatgctctcccttggcatgtg
cttgcctacattcggttaactgaggaggacacaacttcctcatctcgtatcttcattaag
atccttttccaggaattatcagaacacttggggattaggctactaaatgagaggcttcag
gatccaacgatgcaggagtcacttgaatctatcttccctaaagataatccaaagaacacg
aggtttgcaatcaacttctttacatccataggtcttggaggcatcacagagaatctgaga
gagtatctgaagaacatgccacgcctcatcatgcaacagcagaagcaagttgcagaatca
gaatcagggtcatcatctggatctgagagttctggttccgagtctgaatctgagtcagac
tcatcctcatcttccagttcggatgaaagcgacagagagaagaggaagcggagaagaaga
tcatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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