KEGG   Carnobacterium sp. 17-4: CAR_c03920
Entry
CAR_c03920        CDS       T01452                                 
Symbol
yvcJ
Name
(GenBank) hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
crn  Carnobacterium sp. 17-4
Brite
KEGG Orthology (KO) [BR:crn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:crn03019]
    CAR_c03920 (yvcJ)
Messenger RNA biogenesis [BR:crn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     CAR_c03920 (yvcJ)
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_18 AAA_22 SKI Csm1_B DUF5447 AAA_30
Other DBs
NCBI-ProteinID: AEB29113
Position
401252..402139
AA seq 295 aa
MVDSLQLVILTGMSGAGKTVAMQSFEDMGYFCVDNMPPSLLPKFWELVKESGKLTKIALV
IDLRSRAFFEEIVTALESMDNTSFVTTKIVYLDASDEELVSRYKETRRTHPLAMNGRLIV
GIKKERELLEDIKGRAQIVIDTTKLTPRQLREKINSNFKTVDTELFRIEMVSFGFKYGLP
IDADVVMDVRFLPNPHYIDSLRPLTGQDKPVYDYVMKQPETEIFYRKFTDLLEYILPGYK
KEGKNNVTIAIGCTGGKHRSVALVERIAQKIEIDGYPVHVTHRDKGKVKESVNRS
NT seq 888 nt   +upstreamnt  +downstreamnt
atggtagatagtctacaattagtcattcttactggaatgagtggagcaggtaaaacagtg
gcaatgcagagttttgaggatatgggttatttttgtgtggacaatatgccgccaagctta
ctgccgaaattttgggaattagttaaagaatctggtaaattaacaaaaattgctttagtg
attgatttacgttcgagagccttctttgaagaaatcgtaacagctttggaatctatggat
aatacctcttttgtgaccacaaaaatagtctatttagatgcaagtgatgaagaattggtt
tctcgttataaagaaacacgacgcacacatcctttagcaatgaatggacgtcttattgta
ggaataaaaaaagaaagagaattattagaagacataaaagggcgagcacaaattgtgatt
gatacaacgaaattgacgccacgacaattaagagaaaaaatcaatagtaattttaaaact
gttgatactgagttatttagaattgaaatggtatcatttggattcaaatatggcttacca
attgatgcagatgtagtgatggatgtccgctttttacctaatcctcattatattgatagt
ttaagaccattaacaggtcaagataaacctgtttatgactatgtaatgaaacaaccagaa
acagaaatattttatcgtaaatttacagatttattagagtatattttgccgggatacaaa
aaagaaggtaaaaacaatgttactatcgcaattggctgtacgggtggaaaacaccgttca
gtagccttagttgaacggattgctcagaaaattgaaatcgatgggtaccctgtccatgta
actcatcgcgataaaggaaaggttaaagaatcggtgaatcgttcatga

  All links  
Gene (12)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (21)   

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