KEGG   Castanea sativa (European chestnut): 142607278
Entry
142607278         CDS       T11266                                 
Name
(RefSeq) uncharacterized protein LOC142607278
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
csaa  Castanea sativa (European chestnut)
Brite
KEGG Orthology (KO) [BR:csaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csaa03041]
    142607278
Spliceosome [BR:csaa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    142607278
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    142607278
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 142607278
NCBI-ProteinID: XP_075634836
Position
8:complement(51300831..51309615)
AA seq 827 aa
MARKYSSESSGQDESESSDYERRNRGKRDRESDRRSGKQNERRDERVVDDGDDKDRERVN
ERDVRDRDGRSGQRSERVERKESSEEEDGELVERDVGRQEGERSRKYDEHDRRERERSRR
YDEGDKRERERAHRYESEHRRRESEDGGRRRDRRERHDSEENGDEREGRRKSERRNDRTD
DYKHRRHRREDGDRDDKYRRDKEEVNEREKGSRFREREDRDDKGFEDSKPQRQPRVQEVD
LNADNSKLGKSGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNAANV
KNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGELLLRRIV
LQLKRAYKRNDKPQLLAAVKFIAHLVNQLVAHEIIALELLTVLLENPTDSSVEVAVGFVT
ECGSLLQDLSPKGLHGIFERFRGILHEGEIDKRVQFLIEGLFAIRKAKFQGYPAVRPDLD
LVEQEDQITHEISLQEEIDPEIALDIFKPDPNFLENEKRYEELKKTILGDESEEEEGSDA
ASDDDEDDDEDEDDDEEEDEEQMKIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKI
KLEPGQEMELNIMLLECCSQERTYLRYYGLLGQRFCMINKVYQENFDKCFVQQYSMIHRL
ETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLL
NERLNDPTMQDSFESIFPRDNPKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQEQ
AASESESDDESDSSGSSVTGSASSESDPSSSDESERDDRHRKRRRRD
NT seq 2484 nt   +upstreamnt  +downstreamnt
atggctaggaagtacagtagtgagtcgagtgggcaagacgagagcgaatcatctgattat
gagagaagaaatagaggtaaacgagatagggaatcagatagaagaagtggaaaacagaat
gagagacgcgatgagcgtgttgttgatgatggtgatgataaggatagggaaagagtgaat
gagagggatgttagggatagagatgggaggagtgggcagcgtagtgaacgtgtagagagg
aaggagagttcggaggaagaagatggtgagttggtagagagggatgtggggaggcaagaa
ggggagagaagtcgtaaatatgatgaacatgataggcgagaaagggagagaagtcgtaga
tatgatgaaggtgataagcgagaaagggagagggcccatcggtatgagagtgagcataga
cggagggagagtgaggatggtggtagaagaagggatcgacgtgagcggcatgattcagag
gagaatggtgatgagagggaagggcgtagaaaatcagagcgacgaaatgataggactgat
gattataagcataggaggcatagaagggaggatggtgatagagacgataagtataggaga
gataaggaggaggtgaatgaacgagaaaagggtagtcgttttagggagagagaggataga
gatgacaaggggtttgaagattcaaaacctcaaagacagccgagagtgcaagaagttgat
ttaaatgctgataattcgaagttgggcaagagtggaggagtttacattcctccgtttaag
ttggctcggatgatgaaagaggttcaagataaaagcagtgttgaatatcagcggttgaca
tgggatgcccttcggaagagtataaatgggcttgtgaacaaggttaatgctgccaatgta
aagaatataattccagaactcttctcggagaatttgatacggggaagggggctattttgt
cggtcctgtatgaaatcgcagatggcatccccaggttttacagatgtgtttgcagcactc
gttgctgtagtcaatactaagtttcctgaggtgggcgagcttcttttgagaaggattgtt
ttgcagctcaagagagcatataaacggaacgacaagcctcaattactagctgctgttaag
tttattgcacatttagtgaaccaactagtggctcatgagatcatagccttggagctgctt
actgtgctgcttgagaatccaaccgattcaagtgttgaggttgctgttggctttgtcaca
gagtgtggatcacttttgcaagatctctcacctaaaggcttgcatggaatatttgagcgt
ttccgtgggattcttcatgaaggtgaaatagacaaaagggttcaatttctgatagaaggg
ctatttgcgataagaaaagccaagtttcaggggtacccagctgttcgtccagatctggac
cttgtagagcaggaagatcagataacccatgagatctctctccaagaggaaatagatcca
gagattgcccttgatatattcaagccagatcctaatttccttgagaatgagaagcgttat
gaagagttgaagaaaaccattttgggtgatgagtctgaggaggaagaaggttcagatgca
gcttcagatgatgatgaggatgatgatgaggatgaggatgatgatgaggaagaggatgag
gagcagatgaaaataagggatgaaacagagacaaatcttgtaaatcttcggaggacaatc
tatctaacaattatgtccagtgtagattttgaggaggcaggtcataagctcctgaaaatt
aaactagagccaggtcaagagatggagttgaacattatgctcttggaatgctgtagtcag
gagagaacttacctccggtattatggtcttttggggcagcgattctgcatgatcaacaag
gtttatcaggaaaattttgacaaatgctttgtccaacaatattccatgattcaccggctt
gaaacaaataagttgcgtaatgtggcaaagttttttgctcatttactcggcacagatgct
ttgccttggcatgttttagcctatattcgcctaacagaggaggacaccacttcttcatct
cgtatatttattaagattctattccaggaattgtcagagcatctgggcatccgtctgctg
aatgagcgtcttaacgatcccacaatgcaggattcctttgaatctatcttcccaagggat
aatcccaagaacacacggttttcaattaatttcttcacatccattggacttggtggcatc
actgaaaacctacgtgagtacttgaagaatatgccacgccttattatgcaacaagaacaa
gcagcatcagaatccgaatcagacgacgaatctgatagttctggtagttcggttacgggg
tcagctagttcagaatcggatccatcaagttcagatgagagtgaaagggatgacagacac
aggaagcggaggaggagagactaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

Download RDF
DBGET integrated database retrieval system