KEGG   Camelina sativa (false flax): 104752418
Entry
104752418         CDS       T05044                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104752418
Spliceosome [BR:csat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104752418
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    104752418
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 104752418
NCBI-ProteinID: XP_010472850
UniProt: A0ABM0WLM2
Position
16:25437120..25441964
AA seq 901 aa
MGRHDSSSEEDERVRRRDRRRRERSPDVMRSRIETEDVSRRPRVSDDEDHKSSRRDLEIG
AGFVDVERRRGDNKVRKETSSDDEELARRREAGSGYDDDRGKGIEVYSDADGERRVVSKG
RIKDRVRADTSSDEDSGKHLSKDTEDGRNTRRGLEDEDADVRRSRKRSPRVMEKQGRERS
HRGSRVLADKPSDEEDDRQRSRRGRGERSERKHRDHRASDDDEEGEIRSERRGKEKIDRG
NEGLLKRDRRDRDLNDGHENGSRRREIERRGRSRRDDERDRRHNDRYDNSQRDKVRKEDS
SKREEKIEVPKPKLAELNPSESNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTW
DALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALV
AVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAEEIIALELLT
LLLEYPTDDSVEVAVGFVTDCGAMLQDVTPKGLHGIFERFRGILHEGEIDKRVQYLIESL
YATRKANFQGHPAVRPELDLVEEKYSHDISLSQEINPETALDVFKPDPDFVENEKKYEAL
KKELLGEEESEDEDGSDASSEDNDEEEDDSDEEDEEQMRIRDETETNLVNLRRTIYLTIM
SSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQEN
FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIK
ILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLR
EYLKNMPRLIMQQQKQVAESESGSSSGSDSSGSDSESESESSSSSSSDESDREKRKRRRR
A
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgggtaggcacgatagttcctccgaggaagacgagagagttagaagaagggataggaga
agacgagagagaagccctgatgttatgcgatcgaggatcgagactgaagatgtttctcgt
cgtcctagggtttctgatgacgaggaccacaagagctcgcgacgagatctcgagattggt
gctggtttcgtcgatgttgagaggcgccgtggagataataaggtcagaaaagagacttct
tctgatgatgaggaattagccagacgaagagaagcaggctctggttatgatgatgataga
ggtaaaggaattgaggtatatagtgatgctgatggtgagaggagggtggtcagtaaggga
agaattaaggatagggttagagctgacacttcttctgatgaagatagtggtaagcatctt
tcaaaggatactgaagatggaagaaatactcgtagaggtttggaagatgaagatgctgat
gtacggagaagtaggaagagaagccccagagttatggagaaacagggtagagagaggagt
cataggggtagtagagtcctagcagataaaccttctgatgaagaagatgataggcagagg
agtagaagaggtaggggagaaagaagcgagaggaaacatagggatcatcgagcatctgac
gacgatgaggaaggtgagattaggagtgagagaagaggaaaagagaaaattgatagaggt
aatgaaggtctcttgaagagggatcggagggacagagacttgaatgatgggcatgagaat
gggagtcggcgtagagaaattgaaagaagaggtaggagtcggagggacgatgaaagagac
aggagacacaatgatagatatgataatagtcaaagggacaaggtgagaaaggaagatagc
agtaaaagggaagagaagattgaggttccaaagcccaagttggctgaactcaatccgtct
gagagcaatgctatggccttgggaaaaacaggaggagtttatattcctccatttaagcta
gcacgcatgatgaaggaggtggaagataagagcagcgtagagtatcaacggcttacatgg
gatgctctccgtaaaagtattaatgggcttgtgaataaggttaatgctagcaacatcaag
aacataatccctgaactgtttgctgaaaatctcatcagaggaaggggacttttctgccgt
tcatgtatgaagtctcaaatggcatctcctggattcactgatgtctttgcagctttagtc
gctgttattaacgccaaattccctgaagttgctgaacttcttttgaaaagggtcgttttg
cagctaaagagagcgtataagcgtaacgacaagcctcaattgcttgctgctgtaaaattt
atagcacatctagtaaaccagcaagtcgctgaggagatcatagcacttgagttacttact
ctacttctggaatacccaactgatgacagtgtcgaggtggctgttgggtttgtgacggat
tgtggtgcgatgcttcaagacgttacaccaaaaggattgcatgggatttttgagcggttt
cgtggtatactgcacgagggagagatagataagagagttcagtacttgattgaaagtctc
tatgctacgaggaaagcgaactttcagggacatccggccgttcgtcctgagctagatctt
gttgaagaaaaatattcacacgatatctctcttagtcaggaaattaatcctgaaactgct
cttgatgttttcaaacctgatcctgactttgttgagaacgaaaagaaatacgaggcgctg
aagaaagagttactcggtgaggaggagtctgaggatgaagatggctctgatgctagttca
gaggataatgatgaggaggaagatgattctgatgaagaagatgaagagcaaatgagaata
agagacgagacagagactaatcttgttaatcttaggaggacaatctacctgaccataatg
tccagtgttgattttgaggaagctggtcacaaattacttaaaattaagcttgaacctggt
caagagatggaactatgtataatgctcctggagtgttgctctcaggagagaacttatctg
cgttactacgggttgttgggtcaacgtttctgcatgatcaacaaaattcatcaagagaat
tttgagaaatgctttgttcagcagtattccatgattcaccgtcttgagacaaacaagttg
cgtaacgtggccaagttttttgcccatttactgggcacagatgctctcccctggcatgtg
cttgcctacattcggttaactgaggaggacacaacttcctcatctcgtatctttattaag
atccttttccaggaattatcagaacacttggggataaggctgctaaatgagaggcttcag
gatccaacgatgcaggaatcacttgaatctatcttccctaaagataatccaaagaacacg
aggtttgcaatcaacttctttacatccattggtcttggaggcatcacagagaacctgaga
gagtatctgaagaacatgccacgcctgatcatgcaacagcagaagcaagttgcggaatca
gaatcaggatcatcgtctggatctgacagttctggttctgactctgaatctgagtcagaa
tcatcctcttcttctagttcggatgaaagcgacagagagaagaggaagcgaagaagaaga
gcttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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