KEGG   Camelina sativa (false flax): 104763314
Entry
104763314         CDS       T05044                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csat03041]
    104763314
Spliceosome [BR:csat03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104763314
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    104763314
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Cnd1 SR-25
Other DBs
NCBI-GeneID: 104763314
NCBI-ProteinID: XP_010485003
UniProt: A0ABM0XF28
Position
18:10047145..10049307
AA seq 602 aa
MGRRSRMETEHVVGRVRVSDDHENRKSSRRDLDIIGGGDKTGGVYIPPFKLGRMMRDVKD
KSSVEYQRLTWDALRKSINGLVNKVNASNIKNVIPELFSENLIRGRGLFCRSCIKSQMAS
PGFTDVFAALVAVINSKFPQVALLLLKRVVLQLKRAYTRNDKPQLLAAVKFIAHLVNQQV
AEWIIALELLTVLLEDPTDESVEVAVAFVTECGAFLQDVTPNGVNGIFDRFRGILHEGDI
DKRVQYLIEDLFVTRKQKFQGHPAVRPELDLVEEKYSHDVSLDQESDPETGLDVFSPDPD
FVDKEEKYEALKKELLGEESDDEDGSDGSKEGNNEXKDDESDEEEEMRIRDETETNLVNL
RRTIYLTIMSSVDFEEAGHKLLSIKLEPGQEVELCIMLLECCSQERTYLRYYGLLGQRLC
MINRIHQANFEKCFVQQYAMSHRLETNKLHNVATFFAHLLGTDALPWHVLAYIRLTEEDT
TSSSRIFTKILFLKLSDDLGIKELNERLQDSAMQESFESIFPKDNPKNTRFAINFFTAIG
LGGITENLREYLKNMPRLIMQKQKQVAESQSGSDSSGSESDSSSSSSSDESDGGKRKRRR
RA
NT seq 1809 nt   +upstreamnt  +downstreamnt
atgggtaggcgatcgagaatggaaacagaacacgttgttggtagggttagggtttctgat
gatcacgagaaccgtaagagctcgcgacgtgatcttgatatcattggtggaggagataag
actggtggagtttatattcctcccttcaagctagggcgcatgatgcgtgatgtgaaagac
aagagcagcgtcgagtaccaacgtctcacatgggatgctcttcgtaaaagcatcaacgga
ctcgtgaacaaggttaacgcaagcaacatcaagaacgtgatccctgaactcttttctgag
aatctcatcagaggcaggggactcttctgccgttcttgtatcaagtctcagatggcatca
cctggcttcactgacgtatttgcagctttagtcgctgttatcaactccaagttccctcaa
gttgcgttacttttactgaaaagggtagttttgcagcttaagagagcgtatacgcgtaac
gacaagcctcagttgcttgctgctgttaaattcatagctcacctagtaaaccaacaagtc
gctgagtggattattgcacttgaattactcactgtacttcttgaagaccctactgatgaa
agtgtcgaggtggctgttgcgttcgtgaccgagtgtggcgcgtttctgcaagacgttaca
ccaaacggagtgaatgggatttttgatcggtttcgtggtatactgcatgagggagacatt
gataagagagttcagtacttgattgaagatctctttgttactaggaaacagaaatttcag
ggacatccggcggttcgtccggagctagatctagtggaagaaaaatattcacacgatgtc
tctcttgatcaagaaagcgatcctgaaactggtcttgatgttttcagtcctgatcctgac
tttgttgacaaggaagaaaaatacgaggcgctgaagaaagagttactcggcgaggagtct
gatgatgaagatggctctgatggtagtaaagaaggtaacaatgagtagaaagatgatgaa
tctgatgaagaagaagaaatgagaataagagacgagacagagactaatcttgttaatcta
aggaggacaatttacttgaccattatgtctagcgttgattttgaggaagcaggacacaag
ttacttagcattaagcttgaaccaggacaagaggttgaactatgcataatgctcttggaa
tgttgctctcaggagagaacttatcttcggtactacggtttgttgggtcagcgtttatgt
atgatcaacaggatccatcaagcgaattttgagaagtgctttgttcagcagtatgccatg
agtcaccgtcttgagacaaacaagttacataacgtggctacgttttttgctcatttactt
ggcacagatgctctcccttggcatgttcttgcttacattaggttaaccgaagaggacaca
acttcctcatctcgtatcttcactaagatccttttcctgaaactgtcagacgacttgggg
attaaggaacttaatgagaggcttcaggattcagcaatgcaggaatcatttgaatctatc
ttccctaaagataatccaaagaacacgaggtttgcgatcaacttctttaccgccattggt
cttggaggcatcacagagaatctcagagagtatctgaagaacatgccacgcctcatcatg
caaaagcagaagcaagttgcggagtcacaatcaggatctgacagttctggttccgagtca
gactcatcatcttcttctagttcagatgaaagcgacggagggaagaggaaacgaagaaga
agagcttga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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