KEGG   Camelina sativa (false flax): 104770614
Entry
104770614         CDS       T05044                                 
Name
(RefSeq) AP-2 complex subunit alpha-1 isoform X1
  KO
K11824  AP-2 complex subunit alpha
Organism
csat  Camelina sativa (false flax)
Pathway
csat04142  Lysosome biogenesis
csat04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:csat00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    104770614
   04142 Lysosome biogenesis
    104770614
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csat04131]
    104770614
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csat04147]
    104770614
Membrane trafficking [BR:csat04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    104770614
Exosome [BR:csat04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   104770614
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1 RRN3 SPT2
Other DBs
NCBI-GeneID: 104770614
NCBI-ProteinID: XP_010493371
UniProt: A0ABM0XZV2
Position
20:complement(12565115..12573318)
AA seq 1016 aa
MSGMRGLSVFISDIRNCQNKEAERLRVDKELGNIRTCFKNEKVLTPYKKKKYVWKMLYIH
MLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLRLAINTVRNDIIGRNET
FQCLALTLVGNIGGRDFSESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVD
GWADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEY
TYYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRILMGTDVVKNVNKNNASHAVL
FEALSLVMHLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRMLMVTDVQDIIKKHQ
SQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSMREELSLKAAIL
AEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAASKAREYLDKIA
IHETMLKVSAYILGEYGHLLARQPGCSASELFSILHEKLPTVSTPTIPILLSTYAKLLMH
TQPPDPELQKKIWAVFKKYESCIDVEIQQRAVEYFELSKKGAAFMDVLAEMPKFPERQSS
LIRKAEDVEDTADQSAIKLRAQQQPSNALVLADPQPVDGAPPPLKVPIVSGSTNPESVAR
SVSQAYGTLSSIDPQTPSPDLLSDLLGPLAIEAAPGAVSTEQHGPIGAEGVPEEVDGSAI
VPVEEQTNSVELIGNIAERFHALCLKDSGVLYEDPHIQIGIKAEWRGQHGRLVLFMGNKN
TSPLTSVQALILPPAHLKLDLSPVPDTIPPRAQVQSPLEVMNIRPSRDVAVLDFSYKFGT
NMVNAKLRIPATLNKFLQPLQLTSEEFFPQWRALSGPPLKLQEVVRGVRPLALPEMANLF
NSFHVTICPGLDPNPNNLVASTTFYSESTGAMLCLARIETDPADRTQLRMTVGSGDPALT
FELKEFIKEQLITIPMGSRALVPAAGPGPAPAPPVAQPPSPAALADDPGALLAGLL
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgagcggaatgagaggtctctccgtatttattagtgacattcgtaattgccagaacaag
gaagccgagagactccgagttgataaggagctcggaaacatacgtacatgctttaagaat
gagaaggttttaacaccatataaaaagaagaaatatgtatggaaaatgctttatatacat
atgctaggctacgatgtggattttggtcatatggaggcggtttctcttatatctgcgcca
aagtatccagaaaagcaggttggttacattgttacctcttgcttgctcaatgagaaccat
gactttttgaggttggcaataaatacagtgcggaacgatattattggtcggaatgagact
ttccaatgcctagcactaaccttggttggaaatattggtggaagagatttttctgaatca
ttggcacctgatgtccaaaagctacttatttccagtagttgcagacctcttgtaaggaaa
aaagcagcattgtgcctactgcgcttattccgaaaaaatcctgatgctgtcaacgtggat
ggctgggcggatcgtatggcacaacttttggatgaacgagatcttggtgtcttgacatct
tccacaagtcttcttgtagctctggtatctaataatcatgaggcgtactcaagttgtcta
cctaaatgtgtcaaaatattggaacgccttgctaggaaccaggacgttcctcaggagtat
acatactatggcattccatctccttggctgcaggttaaggcaatgagggcacttcaatat
ttcccaaccatcgaagatcccagtaccagaaaagccctctttgaggtccttcagcgaata
ttgatggggacagatgttgtaaaaaatgtgaataagaataatgcgtctcatgctgtgctg
tttgaagctctatccctggtcatgcatcttgatgctgagaaggaaatgatgtcacagtgt
gttgctcttcttggcaagtttatttctgtccgtgaacccaacatcagatatttaggcttg
gaaaatatgacacgaatgctgatggtcacagatgttcaagatatcataaagaagcatcag
tctcagataatcacttctttgaaagaccctgatatcagtattcgtagacgtgcccttgat
ttgctatatgggatgtgcgatgtgtcaaatgcaaaggatatagtcgaagagttgttgcaa
tatctcagcacagcagagttttccatgcgggaggaattatcactcaaagctgctattctt
gctgagaagtttgctcctgatttatcatggtatgttgatgtgatccttcagttaatcgac
aaggctggggattttgttagcgatgacatttggttccgtgtggttcagttcgtaacaaat
aatgaagacctgcagccatacgcggcatcgaaagctagagaatatttggacaaaatcgca
atacatgagactatgttgaaggtcagtgcttatattttgggagagtatggtcacctttta
gctagacaacctggatgcagtgcaagtgaactctttagcatcttacatgaaaagcttccc
acagtgtcgacacccaccattcctattcttctttccacatatgcaaagcttcttatgcac
actcaacccccggatccagaactgcaaaaaaaaatttgggctgtatttaagaagtacgag
agttgtattgatgtggagatacaacagagggcagttgaatatttcgagttgagtaaaaaa
ggggctgcctttatggatgtattggctgagatgccaaaatttccagagcgccagtcttca
ttgataagaaaggcagaggatgttgaagataccgcagaccagagtgccatcaagcttaga
gcacaacaacagccttcaaatgctttggttttggctgacccacagcctgttgatggagca
cccccacctttgaaggttccaattgtaagtggaagcacgaaccccgagtcagtggctcga
tctgtctctcaggcctatggaactttaagtagtatagatccacaaactccatcacccgat
ctcctaagtgacctgctcggtcctcttgcaatagaggctgcacctggagccgtctcaact
gaacaacatggtcccataggggcagaaggagttccagaagaagttgatggttccgccatt
gtacctgttgaagagcaaacaaattcagtggagctgatcggaaatattgccgagagattc
catgctttatgtttgaaagacagtggtgtcttatacgaagatcctcatattcagattggc
atcaaagctgaatggagaggacagcatgggagacttgttctcttcatgggaaacaagaat
acttctccacttacatcagtccaagctctaatactaccccctgcccatttaaaactagat
ctgtctccagtacctgatacaattcctcctcgagcacaggtacaatctccacttgaagtg
atgaacatccgccctagtagggatgttgcggttttggatttctcctacaagtttggtaca
aacatggtcaatgccaaattacgcatcccagcaaccttgaataagtttcttcaacctcta
caattaacatctgaagagttcttcccgcagtggagagcactttcagggccacccttgaaa
cttcaggaagttgttagaggtgtaagacctctcgctcttccagaaatggcgaatttattc
aacagtttccatgtgacaatatgccctgggcttgatccaaaccctaataatctagtggca
agcacaaccttctactctgaaagtacaggagccatgctctgtttggcaagaattgaaaca
gacccagcagacagaacccaattgcgaatgacagtaggctcgggagatcctgctcttaca
tttgagttgaaagaattcatcaaggaacaattaattactataccaatgggatctcgagct
ctagttccagcagcagggccaggaccagcacctgcaccacctgtagctcaaccacctagc
ccagccgctttagctgatgatccgggagctctgcttgctggcttactttaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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