KEGG   Cannabis sativa (hemp): 115707068
Entry
115707068         CDS       T08987                                 
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic
  KO
K03553  recombination protein RecA
Organism
csav  Cannabis sativa (hemp)
Pathway
csav03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    115707068
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csav03400]
    115707068
DNA repair and recombination proteins [BR:csav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     115707068
    RecFOR pathway proteins
     115707068
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    115707068
SSDB
Motif
Pfam: RecA_N RecA_C Rad51 ATPase MT3502_N AAA_25 ATPase_2 DUF7125 AAA_24 ABC_tran AAA_16
Other DBs
NCBI-GeneID: 115707068
NCBI-ProteinID: XP_030490758
Position
1:35570266..35575754
AA seq 423 aa
MESVLPPPNLLPHLRIVSSTSSSLRFFPYSSSSSPRPTFTSAVKPIRRVRCEFDAKVNGA
LSGEFDPRFVDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGG
LPRGRIVEIFGPESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKALGVDVENLI
VCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAL
RKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSAK
GDEEIGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVGKLGCVLDCAEMMEVIAKKGSWYSY
EDQRLGQGRDKALQYLRENPHLLDEIEKIVRSKMFEGSGEVGFLQPRNLSLVQDDEDVFE
EIQ
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggagtcagtacttcctcctccaaaccttctacctcatcttagaattgtttcttcaact
tcatcttcactcagattcttcccttattcttcttcttcttctccacgcccgaccttcact
tctgccgttaaaccaatcaggagagttcgttgcgagttcgatgctaaagttaatggcgct
ctctccggcgagttcgacccccgtttcgtcgaccgccaaaaagcactggaagcagcaatg
aatgacataaataattcttttggaaaaggaagtgttacaagattaggcagtgctggtggt
gctttggttgaaacatttcccagtggctgtttgacattggaccttgccttaggtggtggt
ctcccaagaggaagaattgtggagatttttggaccagaaagtagtggaaagactactttg
gcgctccatgctattgctgaggtgcagaggctaggaggaaatgccatgctggttgatgca
gagcatgcttttgatccagcatattcgaaagcattgggggttgatgtcgaaaacttaatt
gtttgtcagcctgatcatggtgaaatggcacttgagattgcagatagaatgtgcagatct
ggtgcaatagatctaatttgtgttgattctgtctcagctctcactccacgagctgagatt
gaaggtgagattggtatgcagcaaatggggttgcaagcacgtttaatgagccaagctttg
cgtaaaatgtcaggaaatgcctctaaagctggctgtacccttatatttttaaatcaaata
agatataagattggtgtatattatggaaatccagaagtaacaagtggaggaattgcatta
aagttctttgcttcagttcgtcttgaaatacgttcaaccgggaagataaaatctgctaaa
ggagatgaagagattggggttcgggttcgcgtgagggtacaaaagagtaaggtttcaagg
ccatacaagcaggctgaatttgaaattatattcggagagggagtaggtaaactgggttgt
gttttggattgtgctgaaatgatggaggttatagcaaagaagggctcctggtatagctac
gaggaccagagattaggacaaggcagggacaaagcattgcagtacttgcgcgagaacccc
catcttcttgatgaaatagaaaagatagtaagatcgaaaatgttcgaaggaagtggagaa
gtaggttttctgcagccaaggaacttatcactggttcaagacgacgaagatgtttttgaa
gagatccaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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