KEGG   Cynoglossus semilaevis (tongue sole): 103387978
Entry
103387978         CDS       T04866                                 
Symbol
tubb
Name
(RefSeq) tubulin beta chain isoform X1
  KO
K07375  tubulin beta
Organism
csem  Cynoglossus semilaevis (tongue sole)
Pathway
csem04145  Phagocytosis
csem04517  IgSF CAM signaling
csem04540  Gap junction
csem04814  Motor proteins
csem05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:csem00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    103387978 (tubb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    103387978 (tubb)
  09144 Cellular community - eukaryotes
   04540 Gap junction
    103387978 (tubb)
  09142 Cell motility
   04814 Motor proteins
    103387978 (tubb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103387978 (tubb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csem03036]
    103387978 (tubb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csem04812]
    103387978 (tubb)
   04147 Exosome [BR:csem04147]
    103387978 (tubb)
Chromosome and associated proteins [BR:csem03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     103387978 (tubb)
Cytoskeleton proteins [BR:csem04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    103387978 (tubb)
Exosome [BR:csem04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   103387978 (tubb)
  Exosomal proteins of colorectal cancer cells
   103387978 (tubb)
  Exosomal proteins of bladder cancer cells
   103387978 (tubb)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2 DUF5008
Other DBs
NCBI-GeneID: 103387978
NCBI-ProteinID: XP_008321035
Position
13:complement(1760569..1765530)
AA seq 444 aa
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEASGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEAEEDP
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggaaatcgtgcacatccaggccggtcagtgcggcaaccagatcggtgccaagttc
tgggaagtgatcagcgatgaacatggcatcgaccccacaggaacctaccacggagacagt
gacctgcagctggacaggatcagtgtttactacaacgaagcctcgggaggtaaatatgtg
cctcgtgccattctggtggatctggagcccgggaccatggactccgtgagatctggacct
ttcgggcagatcttcagaccagacaactttgtttttggtcagagcggtgctggaaataac
tgggcaaagggtcactacacagagggagccgagctggtggactcggtcctggacgttgtc
cgcaaagagtccgaaagctgcgactgcctgcagggcttccagctgacgcactccctggga
ggtggaaccggctctggtatgggaacgctgctcatcagtaagatccgtgaagagtatccc
gaccgtatcatgaacaccttcagcgttgtgccttcccccaaggtgtccgacaccgtcgtt
gagccctacaacgccactctgtccgtccaccaactcgtagagaacacagacgaaacctac
tgcattgacaacgaggctctgtacgacatctgcttccgtactcttaaactgaccacgccc
acctacggagaccttaaccacctggtgtcagcgaccatgagcggtgtcaccacctgcttg
cgtttccccggccagctcaacgctgatctccgcaaactggcagtcaacatggtgcctttc
cctcgcttgcacttcttcatgcccggcttcgcacccctgaccagccgcggcagccagcag
taccgtgccctcacagttcccgagctcacgcagcaggtgttcgatgccaagaatatgatg
gctgcgtgcgacccacgtcacggccgctatctgaccgtcgcagctgtgttccggggccgc
atgtcaatgaaggaggtggacgagcagatgctcaatgtccagaacaagaacagcagctac
tttgtggaatggattcccaacaatgtcaagaccgccgtctgtgacattccaccccgtggc
ctgaagatggcagtcaccttcattggcaacagcaccgccatccaggagcttttcaagcgc
atttccgagcagttcacagctatgttccgtcgtaaggctttcttgcactggtacacgggc
gaaggcatggatgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtcc
gagtaccaacagtaccaggacgccaccgccgaggaagaaggggagttcgaggaggaggcc
gaagaggacccataa

  All links  
Gene (431)   
   RefGene (428)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (441)   

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