KEGG T10503: 134740442

Cydia strobilella (spruce-seed moth): 134740442

Entry

134740442         CDS       T10503

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

cstb Cydia strobilella (spruce-seed moth)

Brite

KEGG Orthology (KO) [BR:cstb00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cstb03041]
    134740442
Spliceosome [BR:cstb03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    134740442
Complex C
   U4/U6.U5 tri-SnRNP related factors
    134740442

SSDB

Motif

Pfam:

MA3 MIF4G SR-25 CCDC106

Other DBs

NCBI-GeneID:

134740442

NCBI-ProteinID:

XP_063528945

Position

4:1923139..1932254

AA seq 994 aa
MDADKDRKRKKDKHRDEESRKEKKSKRARSQDKDQDRDSNRKRRHSRSQSPAVKRERDDR
NREEPKEPEVKKDVPERKAKDIDMLNTRTGGAYIPPARLRMMQAQITDKSSMAYQRLAWE
ALKKSIHGHINKINVGNIGIIIKELLKENIVRGRGLLCRSVIQAQAASPTFTNVYAALVA
AVNSRFPNIGELLLKRLVIQFKRGFKRNDKPTCISSASFIAHLVNQRVAHEIIALELLTL
LVETPTDDSVEVAIAFMKECGQKLSEVSSKGVNTVFEMLRNILHEGQLDKRVQYMIEVMF
QVWKDGFKDHPALIEELELVPEEEQFTHLLMLDDATDPQDILNVFKHDDKYEENEDKYKT
LSKEILGSDAESGEEDGSGESGSEESDDEEEGGEQKEVTIIDNTETNLVALRRTIYLTIN
SSLDFEECAHKLMKMQLKPGQEVELCHMFLDCCAEQRTYEKFYGLLAQRFCNINRMYIGP
FEEIFKESYSTAHRLDTNRLRNVSKFFAHLLFTDSISWEVMECVKLNEEDTTSSSRIYIK
ILFQELAEYMGLKKLNDRLKDPTLQEAFGGVFPRDNPKNTRFSINFFTSIGLGGLTDELR
DHLKQMPKNVPPSITQIQVSSSSSSDSSSSSSESSSSSESDAESKKDKRKKSKKDKNKDK
AQSPEKEKPVERWGHDGFYDQHGPGARRDPGPARPGDGFARPRDSGSHRSDVGFARPHDS
GPHKPDDGFARPRDSGSHRPDDGFARPRDPPRRDRKNGDDRRERGQDDSRRQDRRNDDRR
GEDYRSDRDSGYEDSRRNQEEIRNEGRRRDDSRSGRDSGIEDRRRDESRKNRDRRDKDDI
RESDDRRRRDDDRDDSDDERARQRENRSKRIDKDKSSKEKRNADRRNRENDSDSEEDGTK
NKERKRRDSSEEKRGKKKSKKRSEKENIESDRKKDRRKESSSDSEDERSSKYRTDDGWDI
RRASSIRREAPTGYWDSYKVNPREEKRSKDRRER

NT seq 2985 nt +upstreamnt +downstreamnt
atggatgcggataaagatcgtaaacgcaagaaagataagcatcgtgatgaagagagtcgt
aaggaaaagaagtctaaaagggctcgttcccaggataaagatcaagatagagattcaaat
cgaaagcggaggcattctagatcccaatcaccagccgtcaagcgcgaaagagatgaccgg
aaccgcgaggaacctaaagaaccggaggtcaaaaaggatgttcctgaaaggaaggccaaa
gatatagacatgctgaacacgagaactggcggtgcttacataccaccggcgcggctgcgg
atgatgcaggcgcagatcacggacaagtcttccatggcgtaccagaggcttgcatgggaa
gccctgaagaagtctattcatggtcacattaacaaaattaacgttggcaacataggcatt
attatcaaggaattattgaaggagaacatagtccgcggacgcggtctcttgtgccgttca
gtcatacaagcccaagcggcgtctccaacattcacaaatgtctatgcagcattggtagct
gcagtcaactctcgctttccaaacattggtgaactattacttaaaaggttagtcatccaa
tttaaaaggggtttcaaacggaatgacaaacctacttgcatatcatcagcctcatttatt
gctcatcttgtgaaccaacgagttgcacatgagattatagctttagaattgttaactcta
cttgtagagactcctacggatgattccgttgaggtggcgatagcttttatgaaggaatgt
ggtcagaagcttagtgaggtgtcatcaaagggtgtgaataccgtgtttgagatgttgcgt
aacattttgcatgaaggtcagttggacaagcgcgtgcagtacatgatagaggtgatgttc
caagtgtggaaggatgggttcaaggaccacccggcgctgatcgaggagctggagctggtg
ccggaggaggagcagtttacacacttgctgatgttggatgatgctactgaccctcaggat
atcctaaatgtcttcaaacatgatgataagtatgaagaaaatgaggacaaatacaagaca
ctaagcaaagagatcctgggatctgatgcagagtcaggagaagaagatggctccggagaa
agtggtagcgaagagtctgatgatgaggaagagggcggggaacagaaggaagtcaccatc
atagacaatacggagacaaacttagtagcattacggaggactatatatttgaccattaac
tcaagtttggactttgaggaatgtgcacataagctaatgaagatgcaattgaaaccagga
caggaagtagaactctgccacatgttcctggactgttgcgccgagcagagaacatatgag
aagttctacggattactcgcacaacgcttctgcaatattaacagaatgtacattggtccg
tttgaggaaatcttcaaagagtcatattccacagctcaccgattagacacaaatcgctta
aggaatgtcagcaagttctttgcacatctgctgttcaccgactccataagctgggaggtc
atggagtgtgtgaaactcaatgaagaagacaccacaagttcgagccgcatttacatcaag
atccttttccaagagttggcggaatacatggggctgaagaaactgaatgatcggttgaag
gatccgacgctgcaggaggcgttcggcggcgtgttcccgcgcgacaaccccaagaacacg
cgcttctccatcaacttcttcaccagcatcggtctcggaggcctaactgatgagctccgg
gaccatcttaagcagatgcccaagaacgtgccgccgtcgatcacgcagatccaggtgtcc
agttcgtccagcagcgactccagctcctcttccagcgaatcgtccagctccagcgaatcc
gatgcagaaagcaaaaaagataagcgcaagaaatccaaaaaagataaaaataaagacaaa
gcgcagagtccggaaaaagaaaaacctgtggagcgctggggacacgacgggttctacgac
cagcacgggcccggggcacgccgcgaccccgggcccgccagacccggcgacgggttcgcc
cgaccccgcgactccggctcccacagatccgacgtcgggttcgcccgaccccacgactcc
gggccccataaacccgacgacgggttcgcccgacctcgcgactccgggtcccacagaccc
gacgacgggttcgcccgaccccgcgacccgccaaggcgggacaggaaaaacggagatgac
cgaagggaaagaggtcaagatgattctagaagacaagatagaaggaacgatgacagacga
ggagaggactatagaagtgacagggatagcggctacgaagactccagaagaaaccaagaa
gagataagaaatgaagggcgacgcagagatgattcgagaagcggcagagatagcggaatt
gaagaccgtcgtagagatgagtctagaaagaatagagacagacgtgataaggatgatatt
agagaaagcgacgatcggcgacggagagacgatgatcgtgatgatagcgacgatgaaaga
gccagacaaagggaaaacagaagcaaaagaattgacaaagataagagtagtaaagaaaaa
cggaatgcagacagaaggaatagagaaaatgatagcgattccgaagaagacggaaccaaa
aataaagaaagaaaacgcagagattcgagcgaagagaagcgaggtaaaaagaaaagcaaa
aaaagatctgaaaaggaaaatattgaaagtgatcggaaaaaggatagaaggaaagagagt
agttcagattctgaagatgagaggagttctaaatataggacagacgatggttgggatata
agaagagcaagtagtataagaagggaggctccgactgggtactgggacagttacaaagtc
aaccccagggaggaaaagaggtctaaagataggagggagcgctaa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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