KEGG   Capricornis sumatraensis (Sumatran serow): 138073323
Entry
138073323         CDS       T10522                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
csum  Capricornis sumatraensis (Sumatran serow)
Pathway
csum03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    138073323 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csum03400]
    138073323 (TDP1)
DNA repair and recombination proteins [BR:csum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     138073323 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 138073323
NCBI-ProteinID: XP_068821072
Position
2:complement(1401894..1472643)
AA seq 612 aa
MMSQEGNYGKWTISSSDESEEEKPQPDRPSASLLPDAGQGAAGQPKHTCSEARKAAHRRQ
LEPVKFSSTDSASEASPCKRQKSGSQEDLGWCLSSSEDELPPERQQEQSKDPRLKEEKGP
PSPRDRAARGPGPHGPPTSRGLPEEEDEQEMSGEGQDIWDLLDKGNPFQFYLTRVSGIKP
KYNTGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVRQYPPEFRKKPVLLVHGDKREAKA
HLLAEAKPYGNVTLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHEDWHQKTQGI
WLSPLYPRIIHGTHGSGESATHFKADLISYLAAYNAPPLKEWIDTIQEHDLSETNVYLIA
STPGRFQGNQKDNWGHFRLRKLLKEHASPAPGAESWPVVGQFSSIGSMGADESKWLCSEF
KESLVTLGKESRTLGSAAPLHLIYPSVENVRTSLEGYPAGGSLPYSIQTAEKQNWLHSYF
HKWSADTSGRSNAMPHIKTYLRPSPDFSQIAWFLVTSANLSKAAWGALEKGGTQLMIRSY
ELGVLFLPSAFGLDSFQVKQKFFSGSSQEPTASFPVPYDLPPELYGDRDRPWIWNIPYVK
APDTHGNMWVPS
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgatgtcccaggagggcaattatgggaagtggacaatatccagcagtgatgaaagtgag
gaggagaagccacagccggacaggccatctgcctctctcctccccgacgctgggcagggg
gccgccgggcagccgaagcacacctgctccgaggctcggaaagccgcccacaggaggcag
ctggagcctgtgaaattcagcagcacagactcagcttcagaagcttcgccttgcaaaaga
cagaagagcgggtcccaggaggacctgggctggtgtctgtccagcagtgaggacgagctg
cctccagagcggcagcaggagcagtcgaaggacccgcggctcaaagaggagaaaggcccc
ccttctcccagggaccgcgcggctcggggacctgggcctcacggcccccccaccagccgt
gggctcccggaggaggaagatgagcaggaaatgtcaggggaaggccaggacatctgggac
ttgctggataaagggaaccccttccagttctacctcacgagagtctctgggattaagccc
aagtataacacgggagccctccacatcaaggatattttatctcctctctttgggacactt
gtttcttcagctcagtttaactactgctttgacgtggactggctcgtaagacagtatcca
ccagagttcaggaagaaaccagtcctgcttgtgcatggcgacaaacgggaagcaaaggct
cacctcctggccgaggcgaagccttacgggaatgtcaccctctgccaggcaaagttggat
attgcatttggaacacatcacacgaaaatgatgcttctgctgtacgaggaaggcctccgg
gttgtcatacacacctccaacctcatccacgaggactggcaccagaaaacacagggaata
tggttgagccccttgtacccccgaatcatccacgggacccacggatctggagagtcggcc
acacacttcaaagctgacctcatcagctacctggcagcttataacgctccccctctcaag
gagtggatagacaccatccaggagcacgacctctcagaaacaaatgtttaccttattgca
tcaaccccaggacgctttcaaggaaatcagaaagataattggggacatttcaggcttagg
aagcttctgaaggagcacgcctcccccgcgcccggagcggagtcttggccggtcgtaggc
cagttctccagcattggttccatgggggcagacgagtcaaaatggctgtgttctgagttt
aaagagagcctggtgaccctgggcaaggagagcaggaccctgggaagtgctgctcccctc
catctgatctatccttcagtggaaaatgtacggaccagcttagaaggatatccagctggg
ggctctcttccctatagcatccagacggcggagaaacagaattggcttcattcctatttt
cacaagtggtcagctgatacgtcaggccgcagcaacgccatgccacatatcaagacttac
ctgagaccctctccagacttcagtcagatcgcctggtttcttgtcacgagcgccaacctg
tccaaggccgcctggggcgcgctggagaagggcggcacccagctgatgatccgctcctac
gagctcggcgtcctctttctgccctcagcgtttggcctggacagtttccaagtgaaacag
aaattcttctccgggagcagccaggagcccacagcctccttccctgtgccgtacgacctg
cctccagaactgtacggagacagagatcgaccatggatttggaacatcccttatgtcaaa
gcacctgatacacatgggaacatgtgggttccctcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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