KEGG   Cucumis sativus (cucumber): 101202859
Entry
101202859         CDS       T02486                                 
Name
(RefSeq) WD repeat-containing protein 76 isoform X3
  KO
K24755  WD repeat-containing protein 76
Organism
csv  Cucumis sativus (cucumber)
Brite
KEGG Orthology (KO) [BR:csv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csv04121]
    101202859
   03036 Chromosome and associated proteins [BR:csv03036]
    101202859
   03400 DNA repair and recombination proteins [BR:csv03400]
    101202859
Ubiquitin system [BR:csv04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101202859
Chromosome and associated proteins [BR:csv03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101202859
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     101202859
  DSBR (double strand breaks repair)
   Other DSBR factors
    Others
     101202859
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_THOC3 WDR55 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_Gbeta DSE1_N Beta-prop_WDR3_2nd EIF3I Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd ASA1 Beta-prop_ACSF4 Beta-prop_DCAF4 PAC11
Other DBs
NCBI-GeneID: 101202859
NCBI-ProteinID: XP_011655849
UniProt: A0A0A0LW60
Position
1:complement(15587360..15591249)
AA seq 543 aa
MASQALTDYERQRLENIRRNDEMLAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKK
ETPMVLRRSLRARGIPPDAKKLVDIDDLTESATKIRKSETKSMSSPRVLGPLEMVEVCSE
RESHPSLIESILGVLSKSLLSRSGKEELVDDVKEFKMGGRNGNFSNEVEIEGGGDGNCLK
MDPIDNYSNLIKRVTEGLISDVKDPLLSSIKMEHKNDGSCLKPASLVLNADNIARVVPGR
IMAVRFFPCLDSKMIVVGNKFGEVGFWNADHEGEEGNGVYLYHPHSGPISGISIQRHALS
KVYTSCYDGFIRLMDVEKEMFDLVYRNEDTIFSLSQQSNDANCLYFSEGRGGLNIWDKRT
GNCTMEWTLHEDRINSIDFNVGNSNIMATSSSDGTACIWDLRSVSDEKPQTLKTITHKKA
IHSAYFSPSGRFLATTSFDDTVGIYGGVNFKDTSLIPHDNQTGRWISSFRAIWGWDDSYI
FIGNMKRAVDVISRAYRKRVFVLQSPKISAIPCRFDAHPYDVGTLAGATSGGQVYMWTMS
PDI
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcttctcaagctctcactgactacgagcgacaaaggctcgagaacattcgccgcaac
gatgaaatgttggccgctctcaagctccaatccaaagcttctgaactctccgctgcttcc
aagcgtcaaagagttgaaaccaaatcggaaaaggtttatccgaaaaccaaacctaaaaaa
gagactccgatggttttacgacgttctttgcgcgctcgaggaattcctcccgatgccaaa
aagcttgtagatatagatgatcttacggagtcagctactaagattcggaagtcagaaacc
aagtccatgtcttcgcctcgtgttttaggcccccttgaaatggttgaagtttgtagtgag
agggagtctcatccgtctttgattgaatctattttgggtgttttgagtaagtctctgttg
agtaggtcagggaaagaggaattagttgatgatgttaaggaatttaaaatggggggaagg
aatgggaatttctcgaatgaggtagagattgaaggagggggagatgggaattgtttgaag
atggatcctattgataattattcgaatttaattaaaagggtgactgaaggacttatcagt
gacgttaaagatcccttgctgagttcgattaaaatggaacataagaatgatggaagttgc
ttaaagcctgcatctttggttcttaatgccgacaacatagctcgggttgtgcctgggaga
ataatggccgtgaggtttttcccttgtcttgattctaaaatgatcgttgtaggtaacaag
tttggggaagtcgggttctggaatgctgatcacgagggagaggaaggaaatggagtttat
ttatatcacccccattcgggtcccatttctgggatttcaattcaacgacatgcattgtcg
aaggtttataccagctgctatgatggatttatacgattgatggatgtagagaaagagatg
tttgatcttgtatatcgtaatgaagatactatattttctctctctcaacaatcaaatgat
gcaaactgcttatatttttctgagggtcgtggagggttgaatatatgggataaaaggact
ggaaactgcacaatggaatggacgttgcatgaagataggatcaattccatcgattttaat
gtaggcaatagcaacattatggctacgagttccagtgatggaactgcctgtatttgggat
ttgagaagtgttagtgatgaaaagccccaaaccttgaagacaatcacccacaaaaaggcg
attcattctgcttacttctcaccctctggacgcttccttgcaactactagttttgacgac
actgttggtatatatggtggagtcaactttaaagatacttcgctaataccgcatgataat
cagacaggcagatggatttcttctttcagagcaatatggggttgggacgactcgtacatt
ttcattggaaatatgaagagagcagtagatgttatttcacgggcatatcggaaaagagtg
ttcgttttgcagagccccaaaatatcggcaataccttgcaggttcgatgcacatccttat
gatgttggaacattagcaggagccactagtgggggacaggtttatatgtggacaatgagt
ccagatatataa

  All links  
Gene (23)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (33)   
   Pfam (33)   
All databases (65)   

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