KEGG   Cucumis sativus (cucumber): 101208609
Entry
101208609         CDS       T02486                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101208609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101208609
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101208609
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA
Other DBs
NCBI-GeneID: 101208609
NCBI-ProteinID: XP_011658164
UniProt: A0A0A0KJY5
Position
6:complement(28798590..28804971)
AA seq 646 aa
MARLQVGYLVPLDKNLEVDNSGLKIRLSEGPNSIGRSNVLVSEKRISRKHITLTTSTDGS
AKLLVEGTNPVVINSGDGRKKLGPRESVIIRDGDVIELIPGHYPFKYASHCFNSRPGSED
LGQKRVRQVAHDKISERVAKRAEMGSPLENMQSGSSQSKEANSVEAIRNFHIPDDRLPMT
FRLLSVKGLPPWANTSCVRITDIIQGDILFAVLSNYMVDIDWLIPACPALAKVPQVLVIH
GEGDGTLDNMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN
NKSQGLWMQDFPWKDQNSSSRGCAFEDDLVDYLSALKWPEFPASFPGHGNFNINPYFFRK
FDYSKAAVRLIASVPGYHTGRYLKKWGHMKLRSVLQECIFDKEFQRSPLVYQFSSLGSLN
EKWMAEFAASLSSGFTPDKTPLGLGEPLIVWPTVEDVRCSLEGYAAGSAVPSPLKNVEKG
FLTKYWAKWNSFHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSQAAWGALQKNNSQLM
IRSYELGVLFLPQKRNDYSFSCTKNGGSAQNKSTVSRPSETLEGKTELVTLAWQENKKRE
SLSEVIQLPIPYELPPQPYGPEDVPWSWERRYTQKDVHGAVWPRQF
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggctcgcctccaggttgggtatttggttccgcttgataaaaatctggaggtagacaat
tcggggctaaaaatacgtctctctgagggcccaaattccatcggccgtagcaacgttctc
gtttctgagaagaggatcagccgcaagcacatcactcttaccacctccactgacggttct
gctaaactacttgtggaaggtacgaatccagttgttattaattctggtgatggtagaaag
aaacttggtcctcgtgaaagtgtgataattcgggacggggatgttatagagttgattcca
ggccattatcctttcaagtatgcatcgcattgtttcaattcaaggcccggctcggaggat
ttgggacagaagagagttcgacaagtggcacacgataaaatttctgagagagtggctaag
agggctgaaatgggaagccctttggagaatatgcaatctggatcctcgcagtctaaggaa
gccaacagtgtggaagctattcgcaattttcacattcccgacgatagattgccaatgact
ttcagacttttgagtgttaaaggcctgcctccatgggctaatacatcatgtgtgaggatt
actgatattatacagggagacattctcttcgctgtcctgtcaaattacatggtggatatt
gattggttaatacctgcatgtcctgctcttgcaaaagttcctcaggtgctggttattcat
ggcgagggtgatggaacactggataacatgaagaggaagaagcctgctaattggattttg
cacaaaccaccactacccatatcttttgggactcaccattctaaagcaatatttcttgtc
tatcctcgaggaataagaatggttgtacacactgcaaatttaatctatgttgattggaac
aacaaaagtcaaggtttatggatgcaagatttcccctggaaagatcaaaattcttcttca
agaggatgtgcattcgaagatgacttggttgattatcttagtgctttgaagtggccagaa
tttcctgctagttttccaggtcatggaaacttcaatatcaatccatattttttcagaaag
tttgattatagtaaagcagcggttagattgatcgcttctgtgcctggatatcacacgggt
cgctatttaaagaagtggggccatatgaaactacgttctgttctccaggaatgcattttt
gataaagagtttcagagatctcctcttgtttaccagttctcttcccttggatcattgaat
gagaaatggatggcagagtttgcagcatcactgtcatcaggtttcacacctgataaaacg
cctctaggccttggggaaccactaatagtatggcctactgtggaagatgtcagatgctct
ctggagggttatgctgctggaagtgccgttccaagtccattaaagaatgtggagaaggga
tttttgacgaagtattgggcaaaatggaattcattccacagtggccgatgtcatgcaatg
ccgcacataaagacatttgctcgttataatggtcaaaaacttgcttggttagtgctaacg
tcatctaacctcagccaagctgcctggggagcacttcagaagaacaattctcagctaatg
attcgttcctatgagcttggggtgctctttcttcctcaaaaaaggaatgattacagtttt
tcctgtaccaagaatggcggttcagcacagaacaagtcaacagtctcaagaccatcagaa
accttggaaggaaaaacagaattggtgacattggcttggcaagaaaacaagaagagggaa
tcattgtctgaagtaattcaattgcctataccttatgaactccctcctcagccatatggc
cctgaagatgtaccctggtcttgggaacgtcggtatacccaaaaagacgtccatggtgca
gtttggccacgtcaattttag

  All links  
Gene (25)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (10)   
   RefSeq(nuc) (6)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (40)   

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