KEGG   Cucumis sativus (cucumber): 101216867
Entry
101216867         CDS       T02486                                 
Name
(RefSeq) transcription factor bHLH140
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
csv  Cucumis sativus (cucumber)
Pathway
csv03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101216867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csv03400]
    101216867
Enzymes [BR:csv01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     101216867
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     101216867
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     101216867
DNA repair and recombination proteins [BR:csv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101216867
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     101216867
SSDB
Motif
Pfam: DcpS_C AAA_33 Macro zf-C2HE HIT AAA_18 Zeta_toxin AAA ABC_tran CPT AAA_16 nSTAND3 AAA_22
Other DBs
NCBI-GeneID: 101216867
NCBI-ProteinID: XP_011651853
UniProt: A0A0A0L9U1
Position
3:28781222..28785018
AA seq 746 aa
MDMDTDENSNAKGKEGQGKLIMVILVGAPGSGKSTFCELVMGSSSRPWVRICQDTIGNGK
SGTRAQCLKTATSALNDGKSVFVDRCNLEIEQRADFVKLGGPQVDVHAVVLDLPAQLCIS
RSVKRTGHEGNLSGGKAAAVVNKMLQKKELPKLNEGFTRITFCHNESDVLSAIDMYKSLD
LHTMLPHGCFGQKNPDKKVQLGITKFLKKAEKPSKTCSSANTDKNSPTPQPTQEKRESCG
KKEESSCTMSRNVAMESEKGESPGIRSLKDKISQSDPPTLAFPSISTSDFKFSHEKAAEI
IVEKVEEFMDKLGNARLVLVDLSHGSKILSMVKAKATEKNISSTKFFTFVGDITKLNSEG
GLRCNVIANAANWRLKPGGGGVNAAIFSAAGSGLEVATKQQANSLQPGNAVAVQLPSTSP
LLNREGVTHVIHVLGPNMNPQRPNYLNNDYDEGCKLLGNAYSSLFQAFISIVQDKYKSVK
GIHECLGSTPPELQKHSEDGHHKFKRENLQNLERSKKWKGSQNSTEGLNQNNNTVPKKSK
HWGSWAQALYDTAMHPERHTNSVLETSDDVVVLYDIYPKARKHLLVVARHEGLDQLADVC
TEHLPLLRTMHAMGLKWINKFFREDGPLVFRLGYHSAPSMRQLHLHVISQDFDSSHLKNK
KHWNSFNTDFFRDSVIVINEVSSHGKANIMDDESLMSMELRCNRCRSAHPNLPKLKAHIS
KCQAPFPSTLLEGGRLVVEPSNAPLS
NT seq 2241 nt   +upstreamnt  +downstreamnt
atggacatggatacagacgaaaattcgaatgctaaaggaaaggaagggcaaggaaagctc
ataatggtaatattagtgggtgcacctggaagtggcaagtccaccttttgcgaacttgtt
atgggttcctcttctcgcccttgggttcgaatctgtcaggataccattggaaatggcaag
tctggaaccagagcacagtgcttgaagactgcaacgagtgcactgaatgatggaaaaagt
gtattcgtggacaggtgcaatcttgaaatagagcagcgtgcagattttgtgaagctcggg
ggccctcaagtggatgtacatgctgttgtattagatcttcctgctcagctctgtatctct
cgttctgttaagcggactggtcatgaagggaacttatcaggtggaaaagctgctgctgtt
gtgaataaaatgctgcaaaagaaagaattgcccaaacttaatgaagggttcactcgcata
accttttgccataatgagtccgacgttctatccgctatagatatgtacaaatcgcttgat
ttacatactatgcttccacatggatgttttggacagaagaacccagacaagaaagtacaa
cttggcataacgaagttcttgaagaaagcagaaaaaccttcaaaaacgtgttctagtgcc
aataccgacaagaattctccaactcctcaacctacccaggaaaagagggagtcttgtggt
aaaaaggaagagtcttcctgcacaatgtcgagaaatgtagctatggagtcagagaaaggt
gaaagtccaggcattagatccttaaaagacaagatttctcaaagtgatccaccaactctt
gcattcccatctatttcgacttcagatttcaagtttagccatgagaaggctgctgaaatt
attgttgagaaggttgaagaattcatggataagcttggaaatgccagacttgtactggta
gacttgagtcatggatcaaagatattgtctatggttaaagctaaagcaaccgagaaaaat
attagttccaccaagttttttacattcgtaggtgatataactaaactcaattccgaaggt
ggattgcgctgcaatgttatagccaatgctgcaaactggcgactgaaaccaggaggtggt
ggtgtgaatgctgcaatttttagtgctgcaggttccggtctggaagtggcaactaaacaa
caagcaaactcccttcaacctggaaatgccgtggctgttcaattgccttcaacttctcct
ttattaaatagggaaggagtaacccatgtcatacatgttcttgggcccaacatgaatcca
caaaggccaaattatctcaacaatgactatgatgaaggttgcaagcttcttggcaatgct
tactcttccctatttcaggcctttatttcaatcgtacaagacaaatacaagtcggttaag
ggaattcatgaatgtctcggctcaacacctccagaactacaaaagcactctgaggacggt
catcacaagtttaagagagagaatttgcaaaatcttgaaagaagcaaaaaatggaaagga
tctcagaactcaaccgaaggattaaaccaaaacaacaatactgttcccaaaaagagtaag
cactggggttcgtgggcacaagcactttatgacactgcaatgcatcccgagcgacatacc
aattctgtactagagacatcagatgatgttgtagtactgtatgatatttatccgaaggca
cgcaagcatcttttagtagtggctcggcatgaaggcctcgatcaactagccgacgtatgt
acagaacaccttccattattgaggacaatgcacgctatgggtttgaagtggatcaataag
ttctttcgtgaagatggcccattggtctttcgcctcggataccactcggctccatcaatg
aggcagctgcacctccatgttataagccaggatttcgattccagtcatctgaaaaacaag
aagcactggaattctttcaacaccgatttcttcagagactcagtcatcgttataaacgaa
gtcagtagccatggaaaggcgaacatcatggacgatgagagcttgatgtctatggagtta
cgttgcaacagatgcagaagtgctcatcccaacttacccaagttgaaagcgcatatttcc
aaatgccaagcgcctttcccttccacactgctcgagggcggtcgtttagtcgttgagcca
agtaatgctcctctctcttag

  All links  
Gene (26)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (13)   
All databases (44)   

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