KEGG   Crotalus tigris (Tiger rattlesnake): 120312355
Entry
120312355         CDS       T08476                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig00900  Terpenoid backbone biosynthesis
ctig01100  Metabolic pathways
Module
ctig_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    120312355 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ctig01006]
    120312355 (GGPS1)
Enzymes [BR:ctig01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     120312355 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     120312355 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     120312355 (GGPS1)
Prenyltransferases [BR:ctig01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   120312355 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 120312355
NCBI-ProteinID: XP_039208932
Position
Unknown
AA seq 356 aa
MTISRGSPNHAVRHFFPFSLAVLLPLIGGHTHLGVTTTWELYYGVTALERLRITVLELIT
NKLYGVKMHSIIYVLFKIIGKQVRSKLSQAFNHWLNVPEDKLQIIIEVTEMLHNASLLID
DIEDNSKLRRGFPVAHSIYGIPYVINCANFVYFLGLQKVLTLDHPDAVKVFTRQLLELHK
GQGLDIYWRDTYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSSYKSDLKPLLNTLGLFF
QIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTENVDIK
KYCVHYLENVGSFEYTRKTLEELEAEAYKQIGLLGGNPELTALIKHLSRMFKDNEN
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgaccatttcacgggggtcgccaaaccatgctgtccgccatttttttcccttttcccta
gctgtcctactccctcttattggtggccacacccacttgggggtcaccacaacatgggaa
ctgtattatggggtcacggcattagaaaggttgagaatcactgtcctagagcttattaca
aataaattatatggagtgaaaatgcacagtattatctatgttctttttaaaatcataggt
aaacaggtcagaagtaaactttctcaagcctttaatcactggttgaatgttccagaagac
aaactacagattataattgaagttacagaaatgttgcacaatgcaagtttgcttatagat
gacatagaagacaattcaaagctacgacgtggttttccagtggcccatagcatttatgga
ataccgtatgtgataaactgtgcaaactttgtatatttccttggtctacaaaaggtttta
acacttgatcatccagatgctgtaaaagtattcactcgtcaattacttgaactccataag
ggccaaggcctggatatttactggagagatacatatacctgtcctacggaagaagaatat
aaagctatggttctgcaaaagacaggtggcctttttggactagccgtgggccttatgcag
ttattttccagttataaaagtgatttgaaaccactccttaacactcttgggctcttcttt
caaattagagatgattatgcaaatttacactccaaagaatatagtgaaaacaaaagcttt
tgtgaagacctaactgaaggaaagttctcattcccaactattcatgcaatatggtcaagg
ccagagagcacacaggttcaaaatattctgcgacagagaactgaaaatgtggatataaaa
aaatactgtgtacattaccttgagaatgtggggtcctttgaatatacccggaaaacacta
gaagaacttgaggctgaagcttataaacaaattgggttgcttgggggcaaccctgaactt
acagcattaattaaacatttaagcagaatgttcaaggacaatgaaaattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (9)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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