KEGG   Cheilinus undulatus (humphead wrasse): 121527192
Entry
121527192         CDS       T07473                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121527192 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cud03400]
    121527192 (tdp1)
DNA repair and recombination proteins [BR:cud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121527192 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 121527192
NCBI-ProteinID: XP_041669992
Position
LG1
AA seq 624 aa
MSQDSQHGKWTISSSDDDDDDLPPSGTSTSKPYPPPASNNSSRWSSSTPSPKLEPERPSV
DLKPQPDNPPVSSLVIGSEARQSAAMNLSNPVKFESTSSVAVKRNKEVSEGSGWALSDSD
DDEDVKKNNVSNPPKKAPPSPKKKKVKVANERPPSPHGRVYYIDEPEDFFESSPPCLNDP
YRFYLNKVTGLDKKYNTGALHIRDILSPLFGTLKESVQFNYCFDIAWMVKQYPPEFRDRP
VLIVHGDKREAKARLVQQAQPFPHVRFCQAKLDIAFGTHHTKMMLLWYEEGFRVIILTSN
LIRADWYQKTQGMWMSPLFPRLPKGSSESAGESPTFFKRDLLEYLASYRAPELEEWIQRI
KEHDLSETRVYLVGSTPGRYVGSDMDRWGHLRLRKLLYDHTDPVPGEERWPVIGQFSSIG
SMGLDKTKWLAGEFQRTMTMLGKSSLRPDPPIHLVYPSVEDVRTSLEGYPAGGSLPYSIQ
TAQKQLWLHSYFHRWKANTTGRSHAMPHIKTYMRASPDFSQLAWFLVTSANLSKAAWGAL
EKNNTQVMVRSYELGVLFIPSAFNMKTFPVHRNPFPVSSSSSSSGFPVPFDLPPSCYSPK
DQPWIWNIPYSQAPDTHGNIWVPS
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgtctcaggacagtcaacatggaaaatggaccatctccagcagcgatgatgacgacgat
gacctccctccttctgggacgtcaacatctaagccctatccacctcctgcatccaataac
agttcccgctggtcttctagtactcccagccccaaactggaacccgagagaccctctgtg
gatcttaaaccacagccagataacccccctgtgtcctcgcttgttattggctctgaggcc
agacaatcagcagcaatgaacctgtcaaatccagtgaagtttgaaagcacttcatcagta
gctgtgaagaggaataaagaggtgtcagaggggtcaggctgggctctctctgacagtgat
gatgatgaagatgtgaagaagaacaatgtcagtaacccaccaaagaaagctcctcctagc
ccaaaaaagaaaaaagtaaaggtagcgaatgagcgcccgccgagtcctcatggccgggtt
tactacatcgatgaaccagaggacttctttgaatccagtcctccttgtttaaatgaccca
tacaggttttacctcaacaaagtgacagggctggacaagaagtacaacactggagctcta
cacatcagagacatcctctctccattgtttgggaccctgaaagagtcagtacagttcaac
tactgctttgatattgcctggatggtaaagcagtacccaccagagtttagggatcgtcca
gttttgatagtccatggagacaagagggaggccaaagctcggcttgtccagcaggctcag
ccttttccacatgttcgattctgccaggccaagctggacattgcttttgggactcaccac
acaaagatgatgttgctgtggtacgaagaaggcttcagggtcatcattttgacctccaac
cttatcagagccgactggtaccagaaaacacaagggatgtggatgagcccattgtttcct
cggttaccaaagggcagcagtgagagtgcaggtgagtcgccaaccttctttaagagggac
ctgctggagtatctggcatcatacagagcacctgaactggaggagtggatacaacgtatc
aaagagcacgacctgtcagaaaccagagtttatttggtcggctcgactccagggaggtat
gtgggttcagacatggatcgctggggtcacctgaggctgaggaagctactgtatgaccac
acagatcctgtccccggcgaggagaggtggcctgtgattggtcagttctccagtattggc
tccatggggctggataagaccaaatggttggcaggggagtttcagcgcaccatgaccatg
ctggggaagtcatctcttcgcccagacccccctatacacctggtgtatccatcagttgaa
gatgtgaggacaagtttagagggctatccagcgggaggctctctgccctacagcatccaa
acggctcagaaacaactctggctccactcttacttccaccgttggaaggcgaatacaaca
ggaaggagtcacgccatgccacacatcaagacgtacatgagggcatctccagatttctct
cagctcgcctggttccttgtcacaagtgccaacctgtccaaagcagcgtggggtgcacta
gagaagaacaacacccaggtgatggttcgatcatatgagctgggagtcctcttcataccc
tctgccttcaacatgaagactttccctgttcacagaaacccatttcctgtttcttcctcc
tcctcttcttctggttttccagtgccttttgacctgccaccttcatgctactctcctaaa
gatcagccatggatatggaacataccatacagccaggctcccgacacgcacggcaatatc
tgggttccctcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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