KEGG T11307: LPA45

Cupriavidus sp. Agwp_2: LPA45_14080

Entry

LPA45_14080       CDS       T11307

Name

(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase

K03500

16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]

Organism

cupa Cupriavidus sp. Agwp_2

Brite

KEGG Orthology (KO) [BR:cupa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cupa03009]
    LPA45_14080
Enzymes [BR:cupa01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     LPA45_14080
Ribosome biogenesis [BR:cupa03009]
Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    LPA45_14080

SSDB

Motif

Pfam:

Methyltr_RsmB-F RsmF-B_ferredox Methyltransf_31 Ubie_methyltran Methyltransf_25 MTS Methyltransf_24 Cons_hypoth95 GCD14 FtsJ TRM5-TYW2_MTfase Fibrillarin Methyltransf_15 Methyltr_RsmF_N

Other DBs

NCBI-ProteinID:

XCZ99337

Position

complement(3011557..3012969)

AA seq 470 aa
MSRNQAGNRPNRSEGHAAPRGKSKGKGSPIRKPVNGNAGRDGAPRMHGGLHATHIQHIDR
LLGKVMLFARPADAVVSYYFRENSKLGHRERGIIAEAIYAVLRRRVEFAQFAESGTGASS
RRLALLGLAATLGRDVLSPFLHPEEAEWLDRLTTIERSSLAPRVRTNLPEWLYDELVRRH
GEEFTAALGDAWLRPAPLDLRVNLGKTSRDAALAELQTAGLGAEPTPMAPAGIRMAGKPA
LNQLPIFVNGLVEVQDEGSQLLCNLVAPKRGEMVVDFCAGAGGKTLALGAAMRSTGRLYA
FDVSEKRLANLKPRLARSGLSNVHPVLIDSERDAKIKRLAGKVDRVLVDAPCSGLGTLRR
NPDLKWRQTPEAVLELTAKQSAILDSAARLVKGGGRVVYATCSVLEAENEAIVRDFLAAH
PNFRLVPASEVLADQKIEVPALAADSGMFALYPHLHQTDGFFAAVLERTS

NT seq 1413 nt +upstreamnt +downstreamnt
atgagccgcaaccaggcaggaaaccgtcccaaccgcagcgagggccatgcggcaccgcgc
ggcaagagcaagggcaagggcagccccattcgcaagcccgtcaacggcaatgccggccgc
gacggcgcgccgcgcatgcacggtgggctgcatgccacgcatatccagcatatcgaccgc
ctgcttggcaaggtcatgctgttcgcgcgcccggccgatgccgtggtgagctattacttc
cgcgaaaacagcaagctgggccatcgcgagcgcggcatcatcgccgaggccatctatgcg
gtgctgcgccggcgcgtcgagttcgcgcaatttgccgaaagcggcacgggcgcgagctcg
cgccgcctggcgctgctgggcctggcggccacgctgggccgcgatgttctgtcgcccttc
ctgcaccccgaagaggccgaatggctggaccgcctgaccacgatcgagcgctccagcctg
gctccgcgcgtgcgcaccaacctgcccgaatggctgtacgacgagttggtgcgccgccac
ggcgaagaatttaccgctgcgctgggcgatgcctggctgcgtccggcgccgcttgacctg
cgcgtcaacctcgggaagaccagccgcgacgcggcgctggccgagctgcagaccgccggc
ctgggtgccgagccgacgccgatggcgcccgccggcatccgcatggccggcaagccggcg
ctgaaccagttgccgatcttcgtcaacggattggtcgaggtgcaggacgagggcagccag
ctgctgtgcaacctggtggcaccgaagcgtggcgagatggtggtcgacttctgtgccggc
gcgggcggcaagacgctggcgctgggcgccgcgatgcgttccaccggccgcttgtacgcc
ttcgacgtgtcggaaaagcggctggccaacctgaagccgcggctggcgcgaagcgggctg
tccaatgtccatccggtcctgatcgactccgaacgcgacgccaagatcaagcgcctggcc
ggcaaggtcgaccgggtgctggtggatgcgccgtgcagcgggctgggtacgctgcggcgc
aaccctgacctgaaatggcgccagacgccggaagcggtgctggagctgaccgctaagcag
agcgcgatccttgactcggcagcgcgcctggtcaagggcggcggccgcgtggtctacgcg
acctgctccgtgctcgaagccgaaaacgaagccatcgtgcgcgatttcctcgccgcgcat
cccaacttccgcctggtcccggccagcgaggtgctggccgaccagaagatcgaagtgccc
gcattggccgcggatagcggcatgttcgcgctgtatccgcatctgcaccagaccgacggc
ttcttcgccgcggtgctggaacgcaccagctga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (14)   
   Pfam (14)   
All databases (15)   

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