KEGG   Calliphora vicina (urban bluebottle blowfly): 135952624
Entry
135952624         CDS       T10781                                 
Symbol
ncm
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
cvj  Calliphora vicina (urban bluebottle blowfly)
Brite
KEGG Orthology (KO) [BR:cvj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cvj03041]
    135952624 (ncm)
Spliceosome [BR:cvj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    135952624 (ncm)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    135952624 (ncm)
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 135952624
NCBI-ProteinID: XP_065358704
Position
2:complement(40870034..40874337)
AA seq 1293 aa
MSKSDSESNSSSGSDSSSASSHQQKSSADEGHDGKNVVEKKKFKTKQKLEKDSKKQKEKS
SETMDKKDRTKEQNNEQKKVCVEKKNHEKSAKDKKAHKKKKHSSAESSSSSSSSSDSPSS
SDSSSSEGEISSTDSSSSESEGERKQKNKSKTDEASKTQKDKEEKLQDKNIAKSPKETME
EANNDNTVKADKVNSKKLDKEKEEAIPTAVEDEQPKDEAKGIIEQEDGEIPEGEADVNNE
KKISPSVEDQQDSNGSSSSKLKSIVGKSYQVKARSKSRSRSRSKTPENGKDRSRSPQNSR
NKRSTKSHSREPQHKRRSRSRSNTRSRSRSLSKERQRSERRHERRRSPSEEYEKRKSRRS
ESLERRREERKKRHAERDEEDKVKRTKRDEENVERREKELNKPDGDPDKVNELDNTTVTD
PKAKITERQRKTVDLLTSRTGGAYIPPAKLRLMQAEITDKASAAYQRIAWEALKKSIHGY
INKVNVDNIAIITRELLKENIVRGRGLLCRSIIQAQAASPTFTHVYAALVSIINSKFPNI
GELLLKRLVIQFKRAFRRNDKAVCLSSSRFVAHLVNQRVAHEILALEILTLLVESPTDDS
VEVAIAFLKECGMKLTEVSSKGIGAIFEMLKNILHEGKLDKRVQYMIEVVFQVRKDGFKD
HQSVIESLELVEEDDQFTHLLMLDDATNTEDMLNAFKFDEEYAVNEEKYKGLSKEILGSD
ASDSGGSGSGSGSGSDSDSSDSDDDEKGEGKPTAEEIIDNTETNLIALRRTIYLTINSSL
DYEECAHKLMKMQLKPGQEIELCHMFLDCCAEQRTYEKFYGLLAQRFCSINKIYIEPFEE
IFKDTYQTTHRLDTNRLRNVSKFFAHLLFTDAISWDVLECIKLNEEDTTSSSRIFIKILF
QELAEYMGLGHLNRKLKDEVLLESLAGLFPKDNPRNTRFSINFFTSIGLGGLTDELRQFL
KNAPKSVPAINAEILANKPINVASSSSSTTSSSSSTSSSSSSESSSDSSSSDSDSASSSD
SEVDKKKRKGKKLKKSKKSASLKKKQKEKLKKKKSKSKKTNKKLKKSKKQESSSSSESDS
ESSSNNESSDSESSASENEKRKSKKKNKDKSKHKDKASKKPKKKSKKSDSDKEDDSSEQE
EINQRKKPETENGFDGTKDRRDYEYNENRRVNNDNKNERPKRAEPQRRDSEVERRREERE
KRHREKEQTRDRDRKRSRSISQTRERRDERVVREDRDRRNRDGERDRDSERRRDRKRYED
HKSRSRSRERSNYVKRDRDYDRSNARNTSKERG
NT seq 3882 nt   +upstreamnt  +downstreamnt
atgtcgaaaagtgattctgaaagtaactcctccagcggcagcgattcgtcgtcagcctcc
agccatcaacaaaaatcaagcgctgacgaaggccacgatggaaaaaatgtggtagagaag
aaaaaatttaaaactaagcaaaaacttgaaaaggactcgaaaaagcaaaaagaaaaaagc
tcggagactatggataagaaagacagaactaaggagcaaaacaacgaacaaaaaaaagtg
tgtgtggaaaagaaaaaccatgagaaatctgctaaggacaaaaaagcacataaaaagaaa
aagcattcaagtgcggagtcctcatcatcttcatcatcgtcttcagattctccttcctcc
tcggacagcagcagtagtgagggtgagatctcttcaacggactcttcgtctagtgaaagt
gaaggggaacgtaaacaaaaaaataaatcaaaaacggatgaagcaagcaaaacacaaaag
gataaagaagaaaagttgcaagataaaaatatagccaaaagtcctaaagaaactatggaa
gaggcaaacaacgataatactgttaaagctgataaagtaaattccaaaaagcttgataaa
gaaaaggaagaagctatccccacagctgtagaggatgaacaacctaaagatgaagctaaa
ggtattatagaacaagaagatggtgaaatacctgaaggggaagctgatgtcaacaacgaa
aagaaaatttcaccctctgttgaagatcaacaagattcaaatggatcaagctcaagtaaa
cttaaaagtatagtaggcaaatcctatcaagtcaaagctcgttccaaatccagatcgaga
tcgcgctcaaaaacccctgaaaatggaaaagatcggagcaggtcacctcaaaacagcaga
aacaaacgatcaaccaaaagccattcgcgagaacctcaacacaaaagacgttctagatca
agatcgaatacacgatcacgttcgcgatctttgtctaaagaaagacaacgttcagagcgt
cgtcatgaacgtagacgttcaccttcagaagagtatgaaaagagaaaatctagacgttca
gagtctttggaaagacgacgcgaagaacgcaaaaaaagacatgccgaacgagatgaagag
gacaaggttaaacgtacgaaaagagacgaagaaaacgtggaaaggcgagaaaaagagctt
aataagccagatggagatcctgataaagtaaatgaattggataacaccactgtaactgat
ccaaaagccaagattaccgaacgtcagcgaaaaaccgttgatttactaacctcacgtact
ggtggtgcatacataccaccagctaaattgcgtcttatgcaagctgaaattaccgacaaa
gcctcggctgcttatcagcgtattgcttgggaagctcttaaaaaatccatacacggttac
attaacaaagtcaatgtggataatatagccattattacacgggaactgttaaaagaaaat
attgtgcgtggtcgtggtcttctttgtcgttccataatacaagcccaagcggcttcgccc
actttcacacacgtctatgccgctttggtgtccatcataaactctaaatttcccaatatc
ggagaattactgctaaaacgtttggttatacaatttaagcgagccttcagacgtaacgac
aaggccgtgtgtttgtcttcctcacgttttgtagcccacttggttaatcaacgtgtggct
catgaaattttagccttggaaattttaactcttttagtagaatcgcccaccgatgattcg
gtcgaagtggcaatagctttccttaaggagtgtggcatgaaactgactgaggtatcttcg
aagggcattggagccatctttgaaatgttgaagaatatcttgcacgaaggtaaactagat
aaacgtgtacaatatatgattgaggtggttttccaggtgcgtaaggatggttttaaggat
catcagtctgttatagagtcactggagttggtggaggaagatgatcaatttacacatttg
ctaatgttggatgatgccacaaacactgaggatatgttgaatgcttttaaattcgatgag
gaatatgccgtcaatgaggaaaagtacaaaggcctgagtaaagaaatactgggtagtgac
gcatcggattctggtggctccggttctggttcgggcagtggatcagattctgattcatcc
gattcggatgatgatgaaaagggcgaaggtaaacctactgcagaagaaattattgacaac
accgaaaccaatttaatagctctacggcgcaccatttacttgaccatcaactcaagtttg
gattacgaagaatgtgcccataaacttatgaaaatgcaattgaaaccgggtcaggaaatc
gaactttgtcacatgttcttggattgttgtgccgaacaaagaacctatgagaaattctat
ggtttgttggcacaacgtttctgttcgattaataaaatctatatagaaccatttgaagag
attttcaaagatacctatcagaccacccatcgcttggatacgaatcgtttgcgaaatgtg
agtaagttttttgcccatttgttattcaccgatgccattagttgggatgttttggagtgt
attaagctcaatgaagaagacactacctcctcgagtcgcatttttataaaaattttattc
caagaattggccgagtacatgggtctaggtcatttgaataggaaactaaaggatgaagta
ttgttggaaagtttagctggtctctttcccaaagataaccctagaaacactagattttct
attaacttctttacctccattggtttgggtggcctaacggatgagttgaggcaatttttg
aaaaatgctcccaagtcggtgcccgctataaatgcagaaattttagctaataaacccata
aatgtggcgagttcatcctcttctaccacatcgtcatcctcctcaacatcatcctcaagt
tcgagtgaatcctcatctgattcttcatcctcagattcagatagtgcatcatcctccgac
tctgaagtggataaaaagaaacgcaaaggaaaaaaactaaagaagtctaagaaatcagca
tcattgaaaaagaagcaaaaagaaaagttaaagaaaaagaaaagtaaatctaagaaaacg
aataaaaaacttaaaaagtccaaaaaacaggaaagctcctcctcttctgaatcagattct
gaatcttcatccaacaatgaaagcagcgatagtgaatcaagcgcaagtgagaacgaaaaa
cgtaaatccaaaaagaagaataaagacaaatctaagcataaagataaagcaagtaaaaaa
cctaaaaagaaatccaaaaaatctgatagtgacaaagaggacgattcctctgagcaggag
gaaattaatcaaagaaaaaaaccagaaactgaaaatggatttgacggcacaaaagacaga
cgagattatgagtataatgaaaatagaagagttaataacgataacaaaaatgaacgtcct
aaaagagctgagcctcaacgacgagacagcgaagttgaaagacgtcgagaggagcgagaa
aaacgtcaccgggaaaaagaacagactcgcgatcgcgacagaaaacgttcccgttcaatt
tctcaaactcgtgaacgacgagatgaacgtgtggtaagagaggatagagatcgtagaaat
cgggatggtgaacgagatcgtgattcggagcgtcgtagagaccgtaaacgctatgaagac
cataaaagccgcagccgtagccgagaacgcagcaactacgttaaaagagaccgagattat
gatcgttcaaatgcacgcaatacttccaaggaacgtgggtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (5)   

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