KEGG   Dermacentor albipictus (winter tick): 135897278
Entry
135897278         CDS       T11267                                 
Symbol
ncm
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
dalb  Dermacentor albipictus (winter tick)
Brite
KEGG Orthology (KO) [BR:dalb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dalb03041]
    135897278 (ncm)
Spliceosome [BR:dalb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    135897278 (ncm)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    135897278 (ncm)
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Cnd1 PRP38 DUF7026
Other DBs
NCBI-GeneID: 135897278
NCBI-ProteinID: XP_065281946
Position
1:232748055..232861591
AA seq 1025 aa
MADQGEQALERKAPRDPDCLLLGDESPLQEDATGEKTSDSQDGPKQWDYFPWDRWSRERS
TDSRERSVDSRDSATRERDLRYAEERKRDRERGRREEVILYRHRDSESSQSDSTEEEEAE
SSNESKVKAPTSTAVNESAENKRTSSQEAAPVSQSHAERTEHSTALTKHTHQRAAKTTKS
PPTSKEAAKRMELAKEASEGSTCVANKRNGTADQKGSGDSHSKTSRNGTKGPPIKEDRRG
VSDQSSGSDEDDHARHTDHDRRKERRQEADVDHKRDDPERRRSDATHDRQRDSDHHRRQD
RGHDRKREHDRNRDRDRKESHDQVGWRGDQHRREDHKHSRREGRSESYRDENRRRDDHRN
DRDRTQRDEQKDHQRDDRRDERREDRRSDSRSDRRRDDRRDDRRDDRRDDRRDDRRGDRR
DDEQLGDQRTDHSGRGGREEAAGTKRARRSSPDTEAEPPRKKDVITGRTGGAYIPPARLR
LMQQQITDKSSVEYQRIAWEALKKSINGLVNKANVGNIDVIIKELMRENLVRGRGLLCRT
IMTAQAASPTFTHVYAAMVAVINTRFPQTGELILKRLVIQFRRSFRRNDKLTCMASVRFV
AHLLNQQVAHEVLALEILTLLLGNPTDDSVEVAVAFLKECGMKLTELTPKGIHAIFERLR
SILHEANLDKRVQYMIEVMFAIRKDGFTAHPSVVKELELVEEESQYTHLLALDDTLDGED
MLNVFKFDPEFAENEERYAEIAKDILGSDDEGDGSGGDDSDDEEEEDDQAEENGEIIDNT
ETNLVALRRTIYLTIQSSLNFEECAHKLLKLELKPGQVSEMCHMILDCCAQQRTYEKFFG
LLAQRFCQLKKEYAEPFEQIFLSSYDTIHRFETNKLRNVAKFFAHLLFTDAIPWNVLSHI
KLTEDDTTSSSRIFIKILFQELCEYMGLPKLNERIKDPTLQDAFEGLFPRDLPKNTRFAI
NFFTSIGLGGLTADLREHLKSAPKPAPVTDIITAPAAAAKKKSTSSSSDSSSGSSSSDSG
SESSS
NT seq 3078 nt   +upstreamnt  +downstreamnt
atggctgatcaaggagagcaagcactggaacgtaaagcacccagagatccagactgcctg
ctactgggagatgagagccctctgcaagaggacgctactggtgaaaagacatccgactcc
caggacgggccaaagcagtgggactacttcccttgggatagatggtcacgtgagaggagc
acagactcaagagaaaggagtgtggactcgcgtgactcagccacaagggagagggatctc
cggtatgctgaagaacggaaacgtgaccgtgagcgtggccgacgtgaggaggtcatccta
tatcgtcacagagactctgaaagctctcagagtgatagtactgaagaggaggaggcagaa
agctcaaatgaaagcaaagtgaaggctcccacatccactgctgtgaatgaaagtgctgaa
aacaaaagaacttcctcacaggaggccgctcctgtatcacagagccatgctgagaggact
gagcatagtacagcattgacaaagcatacccatcagagggcagccaaaactaccaagagt
ccaccaaccagcaaggaagctgcaaagcgaatggaacttgccaaagaggccagtgagggt
tctacgtgtgtggctaacaagagaaatggaactgctgaccagaaagggtctggtgacagt
cacagcaaaacatcgagaaacggcaccaaaggtccaccaattaaggaggatcgtcgtgga
gtgtcggatcaaagtagtggctctgatgaggatgaccatgccaggcataccgaccatgat
cgaagaaaagaacgcagacaagaagcagatgtagaccacaaaagagatgatcctgaaaga
cggcgcagtgatgctactcatgatcgccagcgggattctgaccatcatagaaggcaggac
aggggccatgaccggaagcgggaacatgacaggaacagagacagagaccggaaagaaagc
catgaccaagttggttggagaggggatcaacacagaagggaagatcacaaacacagccgg
agagaaggtcgtagtgagagctatagagatgagaatcgcaggagagatgatcacaggaat
gatcgggaccgcactcagagggatgagcaaaaagatcaccaaagggatgatcgaagagac
gagcggagagaagaccgaagaagtgattcaagaagcgatcggaggagggatgaccgaaga
gatgatcgaagggatgaccgaagggatgaccgaagggatgaccgaaggggtgatcgaaga
gatgatgagcaattgggtgatcagagaactgaccacagtggaaggggcggaagggaggag
gcagcggggaccaaacgagcacggagaagttcacctgacacagaggctgagccaccaagg
aagaaggatgtcatcactgggcgtactggtggtgcctacataccacctgcgcgccttcgc
ttgatgcagcagcagattacggacaagtctagtgtggaataccagcgcattgcttgggaa
gctctgaaaaagagcattaacggcttggtaaacaaagcaaatgtgggaaacatagatgtc
ataatcaaggagctgatgcgggaaaaccttgtccgtggcaggggccttttgtgccgcaca
atcatgactgctcaggcagcatcacccacctttacgcatgtttatgcagcaatggtggca
gtcataaatactaggtttccccagacaggggagcttatactgaaaagactggtgatccag
ttccgacggtcattcaggcgaaatgacaaacttacttgcatggcttctgtgcgtttcgtt
gcgcatcttttgaaccaacaagtggctcatgaagtattggccctggaaatcttgacactc
ctccttggaaacccaaccgatgactcagtggaagtggccgttgcatttctaaaggaatgt
ggcatgaaactgactgagcttacaccaaaaggaatccatgccatatttgaacgcttgaga
agcattcttcatgaggcaaatttggacaaacgagtgcagtacatgattgaagtcatgttt
gctatacgcaaagatggatttactgctcatcccagtgttgtaaaggagcttgaattggtt
gaagaagaaagccagtatactcacttgctggctttagatgacacattggacggggaggat
atgttgaatgtattcaagtttgatccggagtttgctgaaaatgaagagagatacgctgag
attgcaaaagatatactgggcagtgatgatgaaggtgatggatcaggaggtgatgattct
gatgatgaggaggaagaggacgatcaagcggaagagaatggcgagataatagacaacacg
gagactaacctggtggctctcagacgaaccatttatttgacaattcagtcaagcctcaac
tttgaggagtgtgctcacaagttgctcaagcttgagctgaagcctggacaagtgagcgaa
atgtgccatatgattcttgactgctgtgcccagcaacgcacatatgaaaagttctttgga
ctgttggcccagcgtttctgtcagttgaaaaaggagtatgcagagccttttgagcagata
ttcttgagttcgtatgacaccattcatcgttttgagacgaacaagctgcgcaatgttgcg
aagttcttcgcccatcttctcttcacagatgccattccatggaatgtcctgtctcatatc
aagcttactgaagatgacacaacgtcatcgagtcgtatcttcattaaaatcctgttccaa
gaattatgcgagtacatggggctaccgaaattgaatgaaagaataaaagacccgacattg
caagatgcttttgaaggtctgttcccacgagatctgcccaagaatactcgatttgccatt
aatttcttcacatctattggccttgggggactgacggctgacctacgtgagcacctgaaa
tccgctcctaagccagctccagttacggacatcattactgcacctgcagctgcagcaaag
aagaagagcacatcatcaagcagtgactccagtagtggttcaagcagcagtgactcaggc
agtgaatcgagcagttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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