KEGG   Desulforapulum autotrophicum: HRM2_32970
Entry
HRM2_32970        CDS       T00861                                 
Symbol
selB
Name
(GenBank) SelB
  KO
K03833  selenocysteine-specific elongation factor
Organism
dat  Desulforapulum autotrophicum
Brite
KEGG Orthology (KO) [BR:dat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:dat03012]
    HRM2_32970 (selB)
Translation factors [BR:dat03012]
 Eukaryotic type
  Elongation factors
   HRM2_32970 (selB)
 Prokaryotic type
   HRM2_32970 (selB)
SSDB
Motif
Pfam: GTP_EFTU WHD_3rd_SelB WHD_2nd_SelB Beta-barrel_SelB GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D3 GTP_EFTU_D4 SRPRB JetD_C
Other DBs
NCBI-ProteinID: ACN16372
UniProt: C0QLR8
Position
3729124..3731043
AA seq 639 aa
MNQIILGTAGHIDHGKTSLIRALTGIETDRLKEEKERGITIELGFASITLPNGEIVGIVD
VPGHERFIKNMVAGASGIDLVAMAIAADEAVMPQTREHMEICTLMGIKYGFIALTKIDLV
DEELMELAIEDIQEFTRGTFLEDAPIVPVSSTTGQGLDLFRTTLDRICHQIPERPFSPIF
RLPVDRVFSMKGFGTVITGTLASGKIDTGENIMIFPSRITSKVRGIQVHGQSVDTVAAGT
RTAINFQGLDKEAINRGDVLSTPDTLHPSHMVDAELIYLATNPKPAKARTRIRFHSGTSE
ILGNLVLLDREELQPGDTACVQIRLESPVCCLKGDRFVLRSYSPIKTLGGGQVLNPMPKK
HKLFDEKIIQGLSRLISSSDEETLSFFIEESGFQGAPFSDLRLMTHISDKKLDTVLQKML
ANRTVVLADKDRRIFVHGKMFDLLAAQMEEKLAEYHRNNPLKEGMPKQELKSKFRALRDK
DSKLFPLVIARLAKDGKVEQEQNTVRLATHEVALEIDQEEVKQKIAAIYQNAGLTPPFFR
TICTDLDVDQKNATDVLHMLIDEKILVKTKDDLYFDAREIEKLETALVTVLKEKGEITTP
EFKDMTNISRKYVIPLIEYFDSINLTIRVGDTRQLRKKN
NT seq 1920 nt   +upstreamnt  +downstreamnt
ttgaaccagatcatactaggcaccgcaggccacattgaccatggaaaaaccagcctgatc
cgggcgttaaccggcattgaaaccgatcgccttaaagaggaaaaggagcgaggtatcacc
attgagctgggatttgcctccatcaccctgcccaacggcgagattgtcggcatcgtggat
gttccgggccatgaacggttcataaaaaacatggtggcaggggccagcggcatcgatctt
gtggccatggcaattgccgcagacgaggccgtcatgccccagacccgggagcacatggaa
atctgtaccctcatgggcattaaatacgggttcattgcccttaccaagatagatctggtg
gacgaagagctcatggaacttgccattgaggatatccaggagttcacccggggaaccttt
ctcgaggatgcccccattgttccggtctcgtcgaccacgggccagggccttgatctgttc
cgcaccacccttgaccgcatctgtcatcaaattccggaacggcccttttcgccgatattc
cgcctgccagtggaccgggttttctccatgaaaggctttggcacggtcattaccggcacc
cttgcgtcgggcaaaatcgataccggagaaaacatcatgattttcccgtcacggatcacc
tccaaggtgcggggcatccaggtccacggacaaagcgttgacacggttgcagcaggcacc
cggacggccatcaatttccaggggctggacaaggaggcgatcaaccggggggatgttctg
tcgaccccggacaccctgcaccccagccacatggtggatgcagaacttatctaccttgcg
accaacccgaaaccggccaaggcaagaacccgcatacgcttccattccggaaccagcgaa
attctcggcaacctggtgctcctggacagggaagaactgcaaccgggagatacagcctgt
gtccagatccgcctggaatccccagtatgctgtctcaagggggaccgatttgtcctcaga
agctactcacccatcaagacccttggtgggggtcaggtcttaaaccccatgcccaaaaaa
cacaaactctttgacgaaaaaatcatccagggactatcccgcctgatctcaagcagcgat
gaggagaccctctcgttcttcatagaagaaagcggattccagggagctcccttttccgac
ctgaggctgatgacccatatttcagataaaaagctcgacacagtgcttcagaaaatgctt
gccaatcgaaccgttgtcctggccgacaaggaccggcgcatctttgtgcatggcaagatg
ttcgacctgcttgcggcccagatggaagaaaaacttgccgaataccaccggaacaacccc
ctgaaagaaggaatgcccaagcaggagctcaaatctaaattcagggcgctgagggacaag
gattcaaaactgtttccccttgtaattgcgaggcttgccaaggacggcaaggttgaacag
gagcagaatacggtcaggcttgccacccatgaggtggcccttgaaatcgaccaggaagag
gtcaaacagaaaattgccgccatctaccaaaatgccgggcttaccccgccctttttcaga
accatctgcacagacctggacgtggaccagaaaaatgccacggatgtcctccacatgctc
atcgacgagaaaatccttgtcaagaccaaggacgacctctactttgacgcccgggagatt
gagaagcttgaaacggcccttgtgacggttctcaaggaaaagggagaaataaccacccct
gaattcaaggatatgacaaatatatccagaaaatatgtgattcctttgatcgaatatttt
gactcgatcaacctgaccatccgcgttggtgacacaaggcaactcaggaaaaaaaactga

  All links  
Gene (21)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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