KEGG   Dickeya dadantii 3937: Dda3937_01521
Entry
Dda3937_01521     CDS       T01305                                 
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
ddd  Dickeya dadantii 3937
Brite
KEGG Orthology (KO) [BR:ddd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ddd03009]
    Dda3937_01521 (rsmB)
Enzymes [BR:ddd01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     Dda3937_01521 (rsmB)
Ribosome biogenesis [BR:ddd03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    Dda3937_01521 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F RsmF-B_ferredox NusB Methyltransf_25 Methyltransf_37 Methyltransf_31 FtsJ MTS Methyltransf_5 Methyltransf_12 Methyltransf_33 Cons_hypoth95 Methyltransf_15 Methyltransf_11 PMI_typeI_hel Methyltr_RsmF_N
Other DBs
NCBI-ProteinID: ADN00268
UniProt: E0SIU0
Position
4374131..4375426
AA seq 431 aa
MKSKYNLRSIAATALVQVVEQGQSLSHLLPALQRDISEKDRGLLQEICFGVLRVLPQLDW
HLRQLMAKPLTGKQKVLHYLLMVGLYQLIHTRIPPHAALAETVNGAVALKRPQLKGLING
VLRQFQRQQDELQQRLQNNPARYAHPDWLLQRLKKAYPQQWERIVEANNQHPPMWLRVNR
QHHTRAAYLALLQEKEITAYPHAFYPDAIRLGTPCAVNQLPGFEQGWVTVQDASAQGCIH
WLAPQDHEEILDLCAAPGGKTTHILEAAPHAHVLAVDVDEQRLKRVRENLQRLGQHAEVK
CGDGRTPTEWCGDKLFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELASLQQAILEAI
WPRLKSGGTLVYATCSILPEENHQQVAAFLQRHPDAVLVDTGRLEHPGIQNLPAAEDGDG
FFYAKLVKNGQ
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaaaagcaaatataatcttcgtagcattgccgccactgctcttgtccaagttgtcgaa
caaggacaatcactcagccacctgttgcctgcgctccagcgagacatcagtgagaaagat
cgcggcttgctgcaggagatctgctttggcgtactacgcgtattaccacagttggattgg
catcttcgccaactgatggctaaaccgcttaccggtaagcagaaggtactgcattatctg
ttgatggtaggtctttatcagctcatccatacccgtattcctccccatgccgcgctggcg
gagacggttaatggcgcagttgccctgaagcggccacagctgaaaggattgattaatggc
gtattgcgccagtttcaacgtcagcaggacgagttgcagcagcggctgcagaacaatccg
gcacgctatgcgcacccggactggctgctgcaacgactgaaaaaggcctatcctcagcaa
tgggagcgcatcgtcgaggcgaacaatcagcatccacctatgtggttacgagtcaaccgg
caacatcatacccgtgcggcctatctggcgttactgcaggaaaaagagataacggcttac
cctcacgctttctatccggacgccattcgcctggggacaccttgcgccgttaatcagtta
ccggggttcgagcaaggctgggtcaccgtacaggatgcgtcggcgcaaggctgtatccac
tggctggcaccgcaagatcacgaagagattctcgatctgtgcgccgcgcccggcggaaag
acgacccacatacttgaagccgctccccatgctcatgtactggctgtcgacgtggatgaa
caacggctgaagcgggtcagagagaatctgcaacgccttggtcaacatgctgaggtcaaa
tgcggagatggtcgaacaccaacagaatggtgtggagacaagctcttcgatcgtattttg
cttgatgcgccttgctctgcgaccggcgtcattcgccgtcacccggatatcaagtggttg
cgccgcgatagcgacattgccgaactggcttcgctgcaacaagcaattctggaggctatc
tggccacggctgaaaagtggcggcacgctggtgtacgctacctgctctatactaccggag
gaaaaccatcagcaagtggccgcatttctgcaacgccatcccgatgctgtgttggttgat
accggtagactggagcatcctgggattcagaatttacccgcggcggaagatggcgatggt
ttcttttatgcgaagctggtaaaaaacgggcaatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (19)   

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