KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0275653
Entry
DDB_G0275653      CDS       T00245                                 

Gene name
xrcc1
Definition
(RefSeq) BRCT domain-containing protein
  KO
K10803  DNA-repair protein XRCC1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DDB_G0275653 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0275653 (xrcc1)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     DDB_G0275653 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT
Other DBs
NCBI-GeneID: 8620111
NCBI-ProteinID: XP_643529
dictyBase: DDB_G0275653
UniProt: Q86H44
Position
2
AA seq 947 aa
MTTKIITQTQVQTQTPIKPPRLIDLSVSCCSSESEYNKSSNVLLDDTYRIWQTKDKTGKA
FIDLQFPTPSLIHQIDITNAGSAFIEVLVGLVTWEPTEFLVLVPLTNFMSLSETTNKTNR
NRMKSFNTSNFSSQTVPRKWERVRIVCSQPWLDDNLGISLVKIYAPPSKTTPTPTPTPTI
TTTKLSSSSSNNNNVTPQIKSEKLGDISNEIDLTDTSASNLMDTSFESEPNIPLKSDKTQ
ILNFIPELKRSNSSTPKKLSKSATVMLSNPLPGQVLVINQKSKSKGVNKEPEKEIETEEE
DEEEKIEIKKKLDQQQKKQSSQQSSQQSSQQQKQKSKLVEPKQSDEDDSMQDIKIVNNNN
NNNNNNNNKNENQTKSTDRKSLEKLTNTNDGETDEECDDLQIIATPKQQQKLTPFGNLLK
GVVLVIGGIQNPQRGEIREKALEMGAGYKPDWCREATHLVTPFRGTDKFKIAQKSGGSII
KPKWIEDCYKLKSRLPIKNYTFQDDHSDSDGQQDDIAEKIASAKKAKKTISTDSTSKKRK
KKGAPGSDDSDDDSHIPNVYDYNDGFIDNSFSSSEASDDDKEKDPDHLDDHVHENVDDLL
NDGLDYLKRTYGYKPDRDLIQHNPYHKKQKNHHSSDNNNNNTYKSSPSYKPNKYYNEEYD
YNNNNNNNSNSSSSGSSKNKTNNNDNDDESQLTTTTTTTTTTTTKNKDKKEKEEKISYKP
KQQKLDEFDDDSLFDNHDTVLMTPEQIKEEIDRLVNNYNNGNDNENNENSNNKNNSKNNN
KSTINGPTSPNKSTTDDYLEGNSKKSSLSQQSSQSTTNKNQVKDSIIPEKCSTQLPKNNP
HDFKGKEYILNPLPSFFEGFEFYLSVKDEALRKNIVRLITAYKGSISSIPTNSTKFIITD
KTVWDRLFDITKQKYPNVLFLSPSFIMQSHNYQKLSPIDKHLILKSK
NT seq 2844 nt   +upstreamnt  +downstreamnt
atgacaacaaaaataataacacaaacacaagtacagacacaaacaccaataaaaccacca
agattaattgatttaagtgtatcatgttgttcatcagagagtgaatataataaatcatca
aatgttttattggatgatacatatagaatatggcaaactaaagataaaacaggtaaagca
tttatagatttacaatttccaacaccaagtttaattcatcaaattgatattacaaatgca
ggatcagcattcatagaggtattggttggattagttacatgggagccaacagaattctta
gtattggtaccattaaccaatttcatgtcactaagtgaaactacaaataaaaccaataga
aatcgtatgaaatcatttaatactagtaatttttcatcacaaacagtaccaagaaaatgg
gaaagagttagaattgtttgttcacaaccatggttagatgataatcttggtatttcatta
gttaaaatttatgcaccaccttcaaaaacaacaccaacaccaacaccaacaccaacaata
acaacaaccaaattatcatcatcgtcatcaaataataataatgtcacacctcaaataaaa
tcagagaaattgggtgatatctccaatgaaattgatttaacagatacatcagcttcaaat
ttaatggatacaagttttgaatctgaaccaaacattccattgaaatcagataaaactcaa
attttaaactttattccagagttaaagagatcaaattcttcaacaccaaagaaattatca
aaatctgcaactgtaatgttatcaaatccattacctggtcaagttttagttattaatcaa
aaatcaaaatcaaaaggtgtaaataaagaacctgaaaaagaaattgaaactgaagaagaa
gatgaagaagagaaaattgaaattaagaaaaaattagatcaacaacaaaaaaaacaatca
tcacaacaatcatcacaacaatcatcacaacaacaaaaacaaaaatcaaaattagttgaa
ccaaaacaaagtgatgaagatgatagtatgcaagatattaaaattgttaataataataat
aataataataataataataacaataaaaatgaaaatcaaactaaatcaactgatagaaaa
tcattagaaaaattaacaaatacaaatgatggtgaaacagatgaagaatgtgatgattta
caaattattgcaacaccaaaacaacaacaaaaattaacaccattcggtaatttattaaaa
ggagtagtattagtaattggtggtattcaaaatccacaaagaggtgaaattcgtgaaaaa
gcattagagatgggagctggatataaaccagattggtgtagagaggcaactcatctagtg
acaccatttaggggtacagataaatttaaaattgcacaaaaatcaggtggttcaataatt
aaaccaaaatggattgaagattgttataaattgaaatcaagattaccaattaaaaactat
acattccaagatgaccatagtgatagtgatggtcaacaagatgatatagcagaaaagata
gcatcagctaaaaaagcaaagaaaaccattagtacagattcaacaagtaaaaaaagaaaa
aagaaaggtgcaccaggttcagatgatagtgatgatgatagtcatataccaaatgtttat
gattacaatgatggtttcattgataatagtttctcttcatctgaagcttccgatgatgat
aaagaaaaagatcctgatcatttggatgatcatgttcatgaaaatgttgatgatctctta
aatgatggtttggattatttaaaaagaacttatggttataaacctgatagagatttaatt
caacataatccatatcataaaaaacaaaaaaatcatcattcatctgataataataataat
aatacttataaatcttcaccttcttataaaccaaacaaatattataatgaagaatatgat
tataataataataataataataatagtaatagtagtagtagcggtagcagtaagaataaa
acaaataataatgataatgatgatgaatcccaattaacaacaacaacaacaacaacaaca
acgacaacaacaaaaaacaaagataaaaaagaaaaagaagaaaagatttcatataaacca
aaacaacaaaaacttgacgaatttgatgatgattcattatttgataatcatgatacagta
ttaatgacacctgaacaaattaaagaagaaattgatagacttgtaaataattataataat
ggcaatgataatgaaaataatgaaaacagcaataataaaaataatagtaagaataataat
aaatcaacaataaatggaccaacttctccaaataaatcaacaactgacgattatttggaa
ggcaatagtaaaaaatcatcactatcacaacaatcatcacaatcaactacaaataaaaac
caagtcaaagattctattattccagaaaaatgttcaactcaattaccaaagaataaccca
cacgattttaagggcaaagaatatattttaaatccacttccatcattttttgagggattt
gaattttatcttagcgtaaaagatgaagctttaagaaagaatattgttcgtttaattaca
gcatataaaggttcaatttcttcaattccaacaaattcaaccaaatttattatcactgat
aaaactgtatgggatcgtttatttgatattacaaaacaaaaatatccaaatgttttattt
ttaagtccatcctttataatgcaatctcataattatcaaaaactttcaccaattgataaa
catttaattttaaaatcaaaataa

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