KEGG   Dictyostelium discoideum (cellular slime mold): DDB_G0279167
Entry
DDB_G0279167      CDS       T00245                                 

Gene name
cut5
Definition
(RefSeq) BRCT domain-containing protein
  KO
K10728  topoisomerase (DNA) II binding protein 1
Organism
ddi  Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ddi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    DDB_G0279167 (cut5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddi03032]
    DDB_G0279167 (cut5)
   03400 DNA repair and recombination proteins [BR:ddi03400]
    DDB_G0279167 (cut5)
DNA replication proteins [BR:ddi03032]
 Eukaryotic type
  DNA Replication Initiation Factors
   Other initiation factors
    DDB_G0279167 (cut5)
DNA repair and recombination proteins [BR:ddi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     DDB_G0279167 (cut5)
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 LIG3_BRCT BRCT_3 RTT107_BRCT_5 Spore_YhcN_YlaJ
Other DBs
NCBI-GeneID: 8621904
NCBI-ProteinID: XP_641820
dictyBase: DDB_G0279167
UniProt: Q54X69
Position
3
AA seq 1317 aa
MVDSQPAIAFQKSNSSNNFINNNNNNNSNNNNNNNNYNNNNNIIVQQPIFQDLKFYLQGD
FIQNEQGISEKVTKLIQKHGGKRIFSESDDCIFLFQDFMGDAYETARLFKKPIISITYLY
ECAKKNSPLDFSLIKEYPIYSDCLKGCVICTSGFNDEIKSNMSTCIEQLCGEFKYTLSTK
VTHVITNTDASGSKRTRQARALGIPMVTSGWLQDCWGNGKRVDERNYLIPLFFGCLICIT
GFTSLERKEIEREVKKGGGMFSGDLNHFCSLLISSGAISEKCVKAEIWSIPVVTIDWFRA
TIQSGIYQNENDYLLQNQQQQQQQHQSNSLQFQQPPPQQQQQFIQQTRHRQLQKQQLQSL
PVQPENTFSGTTSSLSNTKSYIRPTPMPSKAQSSRTNFNNNNINNNYYNNSNNNNKNRQP
NNNYNNNNNNNNNNNIMMLEEATNEIHLFNGKNILIKGFDTEETERIKEHVMKYASNVVD
SNFIASQWTSTTFDFHYIIVPHGKKVTTQFDSGFENIPKVTIDWFDKCLNNNTLYEPDEC
VIFKPLPNLSLLKNYSITTEGFPENETSFIRSTSKLLGAKFTSKLYPTTTTHLITCMKGP
KYDMAISIGIPVVTPEWLYSSASSGIKLDENLYLFNKLLIVDSIINNNNDNNNNNNNNNN
NNNNNDNNNNNINNESIIFKDLVLFISSKLNGSLESLNYIKYIKELGGTYTTSGFDKITH
YITNEIDNTETPGFVDTNFFQVHPNWLEQCWSSRKRLLESEFQPLKAISNENDGDVPTIQ
SLTKTPSQLFNAINNNNNNGNNNINKNNDNNNEKQKPEELEPTIEMKPLEIDEEEINNNN
NNNNNNNNNNNNNDDEKMIDHDEQDKDIEESEEINKSSTITSTTINTTTNTTTTKPSGMD
TIFKILSSFPPNGNIINNNHSMKSHSKISFQKRSIDFYNNQQNNMSMPQKPNKPFVNISA
LIGNESEKEQDIESDDDNNNNNNNNNNNNNNNNNNSFSNNNSGNSGNTFGNNPSESYDDE
ENDLNNYYATSSYSETSSQMITYGEDTEKKKKEKLMESNFFSKSNANQSFLSNDNAQQSL
LNMLNRRGNLYDNFPSPQQQSRSKKYVFAISGITDDAEQNQVKDIISRLGGLFEAVIAKN
VTHVVTKQISRSEKIMGGCASGAWILQVSYFTASSNSGRFADEPAHQWVPKTNTDPKSQE
HIWTQSAVICQRLVAQNGGRKIFEGARIAYFKINKNIDAWKKILLCGDAEVIEVDYPIDL
KQLYSNNITHLLLIKKKGVEPGEDISTITNDPNSNISILVSNQIVHCLNAGQYLVQK
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggtagattcacaaccagcaatagcatttcaaaaatctaattcctcaaataattttata
aataacaataataataataatagtaacaataataataataataataattataataataat
aataatataatagttcaacaaccaatatttcaagatttaaaattttatcttcaaggtgat
tttatacaaaatgaacaaggtatttcagaaaaagtaacaaaattaattcaaaaacatggt
ggaaagaggatattttcagagagtgatgattgtatattcttatttcaagattttatggga
gatgcctatgaaacagctcgtttatttaaaaaacctataataagtataacctatctttat
gaatgtgccaaaaagaatagtccattagatttttcattgatcaaagagtatccaatttat
tccgattgtttaaagggttgtgtaatttgtacaagtgggttcaatgatgaaattaaatca
aatatgtcaacatgtatagaacaactttgtggtgaatttaaatacacactatcaacaaaa
gtgacacatgtaataacaaacacagatgcatctggttcaaaaagaactagacaagctaga
gcattgggtataccaatggtaacatcaggttggttacaagattgttggggtaatggtaaa
agagtggatgaaagaaattatttaatacctttgttttttggttgcttaatttgcataact
ggtttcacttccttggaaagaaaagaaattgaaagagaagttaaaaaaggtggtggtatg
ttttcaggtgatttaaatcatttttgttctttattaatttcaagtggtgcaattagtgaa
aaatgtgttaaggctgaaatttggagtatacctgtagtgactatagattggtttagagca
actattcaatctggtatttatcaaaatgaaaatgattatcttttacaaaatcaacaacaa
caacaacaacaacatcaatcaaatagtttacaatttcaacaaccaccaccacaacaacaa
caacaatttattcaacaaacacgtcacagacaattacaaaagcaacagttacaatcttta
ccagttcagcctgaaaatacctttagtggtacaactagtagtttatcaaatacaaaatct
tatataaggccaacaccaatgccaagcaaagctcaaagttcaagaacaaattttaataat
aataatattaataataattattataataatagtaataataataacaagaatcgtcaacca
aataataattataataataataataataataataataataataatataatgatgttagaa
gaagcaacaaatgaaattcatttatttaatggaaagaatatattgataaaaggatttgat
actgaggaaacagaaaggataaaagagcatgtaatgaagtatgcatcaaatgtagtagat
tcaaattttatagctagtcaatggacttcaacaacatttgattttcattatattattgta
ccacatggaaagaaagttacaacacagtttgatagtggatttgaaaatataccaaaggtt
acaattgattggtttgataaatgtttaaacaacaatacactctatgaacccgatgaatgt
gttatttttaaaccattaccaaatttatccctattaaagaactattcaattacaacagaa
ggttttcccgagaatgaaacttctttcattaggagtacatcaaaattattaggtgccaaa
ttcacatcaaaattatatccaacaaccactactcatttgataacctgtatgaaaggtcca
aaatatgatatggccatatcaattggtattccggttgtaacaccagaatggttatatagt
agtgcttcttctggtattaaattggatgaaaatttatatctttttaataaattattaata
gttgattcaattataaataataataatgataataataataataataataataataataat
aataataataataatgataataataataataatataaataatgaatcaataatttttaaa
gatttagttttatttatttcaagtaaattaaatggatcattagaatcattaaattatatt
aaatatattaaagaattgggtggtacatatacaacatcaggttttgataaaattacacac
tatataacgaatgaaattgataatacagaaacaccaggttttgttgatacaaactttttt
caagttcaccctaattggttagaacaatgttggtcctcaagaaaaagattattagagtct
gaattccaaccattgaaagctatttcaaatgagaatgatggtgatgttccaactattcaa
tcattaacaaaaacaccttcacaattattcaatgctataaataataacaataacaatggt
aataataatattaataaaaataatgataataataatgaaaaacaaaaaccagaagaattg
gaacccacaattgaaatgaaacctttagaaatcgatgaggaggaaattaataataataat
aataataataataataataataataataataataataatgatgatgaaaaaatgattgac
catgatgaacaagataaagatatagaagaaagtgaagaaataaataaaagttcaacaata
acttctaccactattaatacaactacaaatacaactacaacaaaaccaagtggaatggat
acaatttttaaaatattatcatcatttccaccaaatggcaatatcattaataataatcat
agtatgaaatctcattcaaaaatttcatttcaaaaaagaagtattgacttttataataat
caacaaaataatatgtcaatgcctcaaaaaccaaataaaccctttgtaaatatatcagca
ctaattggtaatgaatctgaaaaagaacaagatatagaatcggatgatgataacaataat
aataataataataataataataataataataataataataataatagttttagtaataat
aatagtggaaatagtggaaatacttttggtaataatccaagtgaaagttatgatgatgaa
gaaaatgatttaaataattattatgcaacttcatcatatagtgaaacaagttcccaaatg
atcacatatggtgaagatacagaaaaaaaaaagaaagagaaattaatggaatcaaatttc
ttttcaaaatcaaatgctaatcaatcatttttaagtaatgataatgctcaacaaagttta
ttaaatatgttaaatagaagaggcaatctatatgataatttcccatcaccacaacaacaa
tctcgttcaaaaaaatatgtatttgcaatttctggtatcactgatgacgccgaacaaaat
caagtcaaagatataatttcaagattgggaggattgtttgaggctgtcatcgcaaagaat
gtaactcatgtcgttacaaaacaaatttcaagatcagagaaaattatgggtggttgcgca
tcaggtgcatggattttacaagtttcctatttcactgcctcgtcaaatagtggaaggttt
gcagatgaacctgcccatcaatgggtcccaaaaactaatactgacccaaagagtcaagaa
catatttggacacaatcagcagtcatttgtcaaagattagtggctcaaaatggtggtaga
aaaatatttgaaggtgcaagaattgcctattttaaaattaataagaatattgatgcttgg
aaaaagattttattatgtggtgatgcagaagtgattgaagttgattacccaattgatctc
aaacaactttatagtaataatataactcaccttttactcataaagaaaaaaggtgtagaa
cctggtgaagatatctcaacaattaccaatgatccaaatagtaatatctcaattttagtc
tccaatcaaatagtgcattgtttaaatgctggtcaatatttagttcaaaagtaa

DBGET integrated database retrieval system