KEGG   Dickeya dianthicola: DDI_3263
Entry
DDI_3263          CDS       T05141                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ddq03021]
    DDI_3263
Transcription machinery [BR:ddq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DDI_3263
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: ATO34431
Position
complement(3377260..3378252)
AA seq 330 aa
MSQNTLKVNELHEDAEFDENGVDVFDDKALAEEETSDSDLLDEELLSQGTAQRVLDATQL
YLGEIGYSPLLTAEEEVYFARRALRGDVSSRRRMIESNLRLVVKIARRYNNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAERLDKPVDDVNRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDNDMKQNIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQVQGLDIEELFRE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgagccaaaatacgctgaaagttaacgagttgcatgaagatgctgaatttgatgagaat
ggagtcgatgtttttgacgacaaagcgcttgcggaggaagaaaccagcgatagcgatcta
ctcgacgaggaattgctctcgcaaggaactgcacagcgcgtgctggacgcaactcagctc
tatctgggagaaatcggctactcacctcttctgacggctgaagaagaagtttactttgcc
cgtcgggcattacgcggcgatgtctcttctcgccgccgtatgatcgagagtaacctgcgg
ctggtggtgaaaattgcccgccgctacaacaatcgagggctggcgttgctggacttgatt
gaagagggaaacctcggtcttatccgcgctgttgagaaatttgaccctgaacgtgggttc
cgtttttcaacttacgccacctggtggatccgtcagaccattgaacgggccatcatgaat
caaacccgaactatccgtttacctatccatatcgtcaaagaactcaacgtttatctgcgt
actgcacgcgagctttcccacaagttggatcatgagccgagtgctgaagagattgccgaa
cggttggataagcctgtggacgacgtcaaccgtatgctgcgtctcaatgagcgcatcacc
tcggtcgatacgccattaggcggggattcggaaaaagcgctgctggatattctggccgat
gagaaggataacggcccggaagacaccacgcaggataacgatatgaagcagaatatcgtt
aagtggttgtttgaactgaacgccaaacagcgtgaggtgctggctcgtcgtttcggtctg
ctgggatacgaagctgcgacactggaagatgttggtcgtgaaatcggcctgacacgtgaa
cgggtgcgccagattcaggtggaagggttacgtcgtctgcgtgaaatcctgcaagtgcag
ggcttggacatcgaagagctgttccgcgaataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

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