KEGG   Dorea formicigenerans: NQ560_05910
Entry
NQ560_05910       CDS       T08666                                 
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
  KO
K03151  tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
Organism
dfm  Dorea formicigenerans
Pathway
dfm00730  Thiamine metabolism
dfm01100  Metabolic pathways
dfm01240  Biosynthesis of cofactors
dfm04122  Sulfur relay system
Brite
KEGG Orthology (KO) [BR:dfm00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00730 Thiamine metabolism
    NQ560_05910 (thiI)
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04122 Sulfur relay system
    NQ560_05910 (thiI)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:dfm03016]
    NQ560_05910 (thiI)
Enzymes [BR:dfm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.4  tRNA uracil 4-sulfurtransferase
     NQ560_05910 (thiI)
Transfer RNA biogenesis [BR:dfm03016]
 Prokaryotic type
  tRNA modification factors
   Other tRNA modification factors
    NQ560_05910 (thiI)
SSDB
Motif
Pfam: ThiI ThiI_fer THUMP QueC ATP_bind_3
Other DBs
NCBI-ProteinID: UWP20950
Position
1195801..1196982
AA seq 393 aa
MRFHTFLLKYGEIGIKGKNRYLFEDALVRQVRYALKDVDGNFDVHKSQARIYVDCEGDYD
YEDTVEHLKRVFGLVGICPVVRMEDKGFEELKKDVVAYMAEMYPDRNFTFKVESRRARKS
YPKNSMEISRDLGEAILYAFPEIKVDVHHPDVLVNVEVRNEIYVYSEIIPGAGGMPVGTN
GNAMLLLSGGIDSPVAGYMVSKRGVGLEATYFHAPPYTSERAKQKVVDLAKIVARYSGPI
KLHVVNFTDIQLYIYDKCPHDELTIIMRRYMMRIAEEFARRDGCLGLVTGESIGQVASQT
MQSLAATNDVCTMPVYRPLIGFDKQDIVDVAEKIDTYETSILPFEDCCTIFVAKHPVTKP
NIEVIRRSEENLAEKIDELMQTALDTAEIIEVK
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgagatttcatacatttttattgaaatacggggagattggtatcaaaggaaagaaccgt
tatctttttgaagatgctcttgtaagacaggtgcgttatgcgttaaaggatgtagacggg
aactttgatgtccacaaatcccaggcaagaatctatgtggactgtgagggtgattatgat
tacgaggatacggtggaacatttgaaaagagtgttcggactggtcggaatctgcccggtt
gtccgtatggaggataaaggtttcgaggaattgaaaaaagacgtggtagcttatatggca
gagatgtatccggaccgcaactttacatttaaggtagagtcacgccgtgccagaaagtca
tatccgaagaactctatggaaataagccgtgaccttggagaggcgattctctatgcgttc
ccggaaatcaaagtagacgtacatcacccggatgtactggtaaatgtagaagtgagaaat
gaaatctatgtttattctgagattattccaggagcaggcggaatgccggtgggaaccaat
ggaaacgctatgcttctgttatccggtgggattgacagcccggtcgcaggctatatggta
tccaaacgaggagttggtcttgaggcaacttatttccatgcaccgccgtacacaagtgag
cgtgcaaagcaaaaagttgttgatcttgcgaagattgtggcaagatattccggaccgatc
aaattacatgttgtgaactttacagatattcagttgtatatttatgacaaatgcccgcat
gacgagctgactattattatgcgccgctatatgatgcgtattgcggaagaattcgcaaga
cgtgatggatgccttggactggtgacgggagagagtatcggacaggtggcaagtcagact
atgcagagcctggctgcaacgaatgatgtatgtacgatgccggtatatcgtccgctgatc
ggatttgataagcaggacattgtagatgtggcagagaagatcgatacttacgagacctcc
attcttccatttgaggattgctgtaccattttcgtggcaaagcatccggtcacaaagccg
aatatcgaggttatccgccgttctgaggagaatctggcagagaagatcgatgaacttatg
cagacagcgttagatacagcagagatcattgaagtgaaatag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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