KEGG T10618: K2L43

Diaphorobacter sp. MNS-0: K2L43_13030

Entry

K2L43_13030       CDS       T10618

Symbol

pcnB

Name

(GenBank) polynucleotide adenylyltransferase PcnB

K00970

poly(A) polymerase [EC:2.7.7.19]

Organism

dim Diaphorobacter sp. MNS-0

Pathway

dim03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:dim00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    K2L43_13030 (pcnB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dim03019]
    K2L43_13030 (pcnB)
Enzymes [BR:dim01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     K2L43_13030 (pcnB)
Messenger RNA biogenesis [BR:dim03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     K2L43_13030 (pcnB)

SSDB

Motif

Pfam:

PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd

Other DBs

NCBI-ProteinID:

QYY24612

Position

complement(2726514..2728109)

AA seq 531 aa
MIKTFIDKLLGKGAAGAGRGTRGRFGKRAEVPAAVHGINPELVDRRASDVVRTLKQAGYE
AYIVGGAVRDLLLGLKPKDFDVATNATPEQVKGLFRRAFIIGKRFRIVHVVHGRGREHEV
IEVSTFRAYMDNAAAEQVGGNEKTSKAQLAGMHHAVDASGRVLRDNVWGPQDEDATRRDF
TVNAMYYDPETEVVVDFHKGIEDAKKRVLRMIGDPATRYREDPVRIIRAVRFAAKLSPLG
FALEPKTAKPLVECEPLLREVPQSRLFDEMLKLLQTGHALASIAQLKSLGLATGIYPLLD
VVVDRSSHPFVQAALADTDRRVGEGKPVAPSFLLACVLWQDVKAGWEQRLGRQQPFPALQ
DAIDDVFDKRIGDVSGRGKLAADMREIWVMQPRFEKRSGSTPFGMVAHLRFRAGFDFLRL
RADVGEVEEALAEWWQEFSLADDARREDMIEQAREEQRARQRKAQPTVRRVPKAAPVATD
DAEPPRRASDAGDSLAEPAAEDAAAPKKRRRRRRKPTGSGASEGGAPAGEA

NT seq 1596 nt +upstreamnt +downstreamnt
atgatcaagaccttcatcgacaaactgctgggcaagggcgccgccggtgcgggccgtggc
acacgcggccgctttggcaagcgtgcggaagtgcccgccgcggtgcacggcatcaacccc
gaactggtggaccgccgcgccagcgacgtggtgcgcacactcaagcaggcgggctacgag
gcctacatcgtcggcggcgcggtgcgcgacctgctgctgggcctcaagcccaaggacttc
gacgtggccaccaacgccacgcccgagcaggtcaagggcctgttccggcgcgccttcatc
atcggtaagcgctttcgcatcgtgcacgtggtgcacggccgcgggcgcgagcatgaggtg
atcgaggtctccactttccgtgcctacatggacaacgcggcagccgagcaggtggggggc
aacgaaaagaccagcaaggcccagctggccggcatgcaccatgccgtggacgccagcggc
cgcgtgctgcgcgacaacgtctggggaccgcaggacgaggacgccacgcggcgcgacttc
accgtcaacgccatgtactacgacccagagaccgaggtcgtggtggacttccacaagggc
atcgaggacgccaagaaacgcgtgctgcgcatgatcggcgacccggccacgcgctaccgc
gaggaccccgtgcgcatcatccgcgccgtgcgctttgcggccaagctcagcccgctgggc
tttgccctggagcccaagaccgccaagcccctggtggagtgcgagccgctgctgcgggag
gtgccgcaaagccgcctgttcgacgagatgctgaagctgctgcagaccggccacgcactg
gcctcgatcgcgcagctcaagtccctggggctggccacgggcatctacccgctgctggac
gtggtggtggaccgttccagccacccgttcgtgcaggccgcgctggccgacaccgaccgc
cgcgtgggcgagggcaagcccgttgcgcccagcttcctgctggcctgtgtgctgtggcag
gacgtgaaggccggctgggagcagcgcctggggcgccagcagcccttcccggcgctgcag
gatgcgatcgacgatgtgttcgacaagcgcatcggcgatgtctccggccgcggcaagctg
gcggcggacatgcgcgagatctgggtcatgcagccgcgcttcgagaaacgctcgggcagc
acgcccttcggcatggtggcgcacctgcgttttcgcgcgggcttcgacttcctgcgcctg
cgcgcggacgtgggcgaggtggaggaggcgctggccgagtggtggcaggaattttcgctg
gccgacgatgcgcgccgtgaggacatgatcgagcaggcgcgcgaggagcagcgcgcgcgc
cagcgcaaggcccagcccacggtacggcgcgtgcccaaggccgcgccagtcgccacggac
gacgccgagcccccgcgcagggccagcgatgccggtgattccctggccgagccagcggca
gaggacgctgctgcgcccaagaagcgccgccgccgtcgccgcaagcccacgggcagcggt
gcatccgagggtggcgcgcccgcgggcgaggcgtga

All links

Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (4)   

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