KEGG   Devosia neptuniae: N8A98_19150
Entry
N8A98_19150       CDS       T08915                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
dnp  Devosia neptuniae
Pathway
dnp02024  Quorum sensing
dnp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dnp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N8A98_19150 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    N8A98_19150 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dnp03019]
    N8A98_19150 (hfq)
   03036 Chromosome and associated proteins [BR:dnp03036]
    N8A98_19150 (hfq)
Messenger RNA biogenesis [BR:dnp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     N8A98_19150 (hfq)
Chromosome and associated proteins [BR:dnp03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    N8A98_19150 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM
Other DBs
NCBI-ProteinID: UXN69322
Position
complement(3331424..3331672)
AA seq 82 aa
MASEKQQNLQDSFLNHVRKQKVPVTIFLVNGVKLQGVITWFDNFCLLLRRDAQSQLVYKH
AISTIMPGAPIQLFDPEQNHDD
NT seq 249 nt   +upstreamnt  +downstreamnt
atggctagcgaaaaacaacaaaatctccaggactctttcctcaaccacgtccgcaagcag
aaggtgcccgtcacgattttcctcgtgaacggcgtcaagctgcagggtgtcatcacctgg
ttcgacaatttctgcctgttgctgcgccgtgacgcccaatcccaactggtctataagcac
gccatctcgacgatcatgccgggcgcgccgatccagctgttcgatccagaacagaaccac
gacgactaa

DBGET integrated database retrieval system