KEGG   Dipodomys ordii (Ord's kangaroo rat): 105993389
Entry
105993389         CDS       T07834                                 
Symbol
Aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
dord  Dipodomys ordii (Ord's kangaroo rat)
Pathway
dord03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:dord00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    105993389 (Aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dord03400]
    105993389 (Aptx)
Enzymes [BR:dord01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     105993389 (Aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     105993389 (Aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     105993389 (Aptx)
DNA repair and recombination proteins [BR:dord03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     105993389 (Aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     105993389 (Aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N DUF8172 Glycoamylase zf-C2H2_4
Other DBs
NCBI-GeneID: 105993389
NCBI-ProteinID: XP_012882082
Ensembl: ENSDORG00000002139
UniProt: A0A1S3G1Z8
Position
Unknown
AA seq 355 aa
MFLRQLLPRDLLVMMRVCWLVRQDSQQHRIKLPHLETVVLGRSPETKITDKKCSRQQVQL
KAECNKGYVKVKQVGVNPTSIDSVIIGKDQEMKLQPGQVLYMVNELYPYIVEFEEEAKSS
GLGAHRKRKRSGNSNSLGDVAQEAEPMTEQEPGTADPSQYPLPPKKGKDASAKKEPLGHW
SQGLKISMQDPKMQVYKDEQVVVIKDKYPKARYHWLVLPWASISSLKAVTSEHLELLKHM
HTVGEKVISDFAGCSKLRFRLGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFNTEYF
LESKAIIKMVQEAGRVTVEDGTSELLKLPLRCHECQQLLPSIPQLKEHLRKHWIK
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgttcttgcgacagctccttcccagagacttgctagtgatgatgcgggtgtgctggttg
gtgagacaggacagccagcagcatcgaatcaaacttccacatttagaaacagtcgtgctt
gggcgcagcccagagaccaaaatcactgataagaaatgttctcgacagcaagtacagttg
aaagcagagtgtaacaagggatatgtcaaggtaaagcaggtaggggtcaatcccaccagc
attgactcagtcataattgggaaggaccaagagatgaagctgcaacctggccaggttctc
tatatggtgaatgaactttatccatatattgtagagtttgaggaagaggcaaagagctct
ggcctaggagcacacaggaagagaaagaggtcaggcaacagcaattccttaggagatgtt
gcccaggaagctgagcctatgacagagcaggaacctgggactgctgaccccagccaatac
cctctgcccccaaagaaggggaaagatgcatctgccaaaaaggaaccactgggccactgg
agtcaaggcttgaagatttctatgcaagaccctaaaatgcaggtttacaaagatgagcag
gtggtggtgattaaggataaatatcctaaggcccggtatcattggctggtcttgccatgg
gcctccatttccagtttgaaggctgtgaccagtgaacaccttgaacttctcaaacatatg
catactgtgggagaaaaggtgatttcagattttgctggatgcagcaaacttcgtttccga
ctgggctatcatgccattcccagtatgagccatgtacatcttcatgtgatcagccaggat
tttgattctccttgccttaaaaacaaaaaacattggaattctttcaatactgaatacttc
ctagaatcaaaagctataatcaaaatggtgcaagaggctggcagagtgactgtcgaagat
gggacgtctgagctcttgaagctgccccttcgttgtcatgagtgtcagcaactgctgcct
tccattccgcagctgaaagagcatctcaggaagcactggataaagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (9)   
   Pfam (9)   
All databases (23)   

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